AT1G26440.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:endoplasmic reticulum 1.000 What is SUBAcon? |
|
||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : ureide permease 5 | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
uptake assays in a yeast mutant indicated this splice variant is not a cellular importer for allantoin, uracil or xanthine | ||||||||||||||||||||||||
| Computational Description (TAIR10) |
ureide permease 5 (UPS5); LOCATED IN: endomembrane system; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: ureide permease 2 (TAIR:AT2G03530.2); Has 249 Blast hits to 246 proteins in 69 species: Archae - 0; Bacteria - 112; Metazoa - 0; Fungi - 0; Plants - 119; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||
| Coordinates (TAIR10) | chr1:-:9144109..9145673 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 41147.00 Da | ||||||||||||||||||||||||
| IEP (calculated) | 5.03 | ||||||||||||||||||||||||
| GRAVY (calculated) | 0.40 | ||||||||||||||||||||||||
| Length | 377 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MMIAQELGIY VVESKGGAIL CLLLSLLCLG TWPALMALLE RRGRLPQHTY LDYSITNFLA AIFIAFVFGG IGESTHEAPS FITQLTQIQD NWPSVLFAMA 101: GTTVNYFLDN GLNRADILFS GVGCFMVAVC LGSAVHSSNS ADIKAKLGKL SGDCETVTPE ECQRLFGEEE EEEEKEMENV KEGSAAFLIA LENKRAIKVL 201: GKSMVVGLGI TFFAGLSFSL FSPLFNLATN DQWHTLKQGV PKLIVYTAFF YFSLSCFVIA VALNISFLYK PVLDSPRSSF REYLSDWNGR GWALAAGLLC 301: GFGNGLQFMG GQAAGYAASD AVQALPLVST FWGIYLFGEY RRSSTRTYAL LVGMLVMFTV AVGLLMASAG ERETRFT |
||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)