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AT5G66250.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
nucleus 0.795
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : kinectin-related
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
kinectin-related; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G17990.1); Has 3699 Blast hits to 3224 proteins in 449 species: Archae - 76; Bacteria - 383; Metazoa - 2012; Fungi - 287; Plants - 250; Viruses - 24; Other Eukaryotes - 667 (source: NCBI BLink).
Protein Annotations
EMBL:AB022211EMBL:AY127030EMBL:AY143849EMBL:CP002688
EnsemblPlants:AT5G66250EnsemblPlants:AT5G66250.1EnsemblPlants:AT5G66250.2EnsemblPlants:AT5G66250.3
entrez:836757ExpressionAtlas:Q9FH63GeneID:836757Gramene:AT5G66250.1
Gramene:AT5G66250.2Gramene:AT5G66250.3hmmpanther:PTHR31161hmmpanther:PTHR31161:SF6
HOGENOM:HOG000242078IntAct:Q9FH63ncoils:CoilPhylomeDB:Q9FH63
Proteomes:UP000006548RefSeq:NP_201426.3RefSeq:NP_851282.1RefSeq:NP_851283.1
TAIR:AT5G66250UniGene:At.28876UniProt:Q9FH63
Coordinates (TAIR10) chr5:+:26469050..26470376
Molecular Weight (calculated) 34606.50 Da
IEP (calculated) 4.82
GRAVY (calculated) -0.37
Length 306 amino acids
Sequence (TAIR10)
(BLAST)
001: MAEKEVVSAS TLESKITEDH HDIWIRGAME KSRSSNISVL KDRFIAAEDS ALVSKDVAQK DIEILLRRVK TATALLTYLK SKATTVAAAD LANLSLETDQ
101: LQDTIDEHDG TYVTEMLQHV ETVTGVMESL ARRAFIAESE AAIEKGKVVL SQEEIQRKVG QLENMSVKLE DMEKFALGTS SILCEMRQRV DDLVEETSRQ
201: KQRATENELE LSRVRRDFES LKSYVTSLIS VRETLVSSEK QFQTIERLFE RLVAKTTQLE SEKVQKEAEV QKLMEENVRL TALVDKKEAQ LLAMNEQCKM
301: MALSSI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)