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AT3G16030.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.993
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : lectin protein kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
CALLUS EXPRESSION OF RBCS 101 (CES101); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT4G21390.1); Has 121576 Blast hits to 119500 proteins in 4422 species: Archae - 101; Bacteria - 13477; Metazoa - 44302; Fungi - 10440; Plants - 35232; Viruses - 450; Other Eukaryotes - 17574 (source: NCBI BLink).
Protein Annotations
EC:2.7.11.1eggNOG:COG0515eggNOG:ENOG410JANZEMBL:AB012247
EMBL:CP002686EnsemblPlants:AT3G16030EnsemblPlants:AT3G16030.1entrez:820848
Gene3D:2.60.120.200Gene3D:2.90.10.10GeneID:820848Genevisible:Q9LW83
GO:GO:0004674GO:GO:0005516GO:GO:0005524GO:GO:0005886
GO:GO:0009620GO:GO:0016021GO:GO:0030246GO:GO:0045087
Gramene:AT3G16030.1hmmpanther:PTHR27002HOGENOM:HOG000116559InterPro:IPR000719
InterPro:IPR001245InterPro:IPR001480InterPro:IPR003609InterPro:IPR008271
InterPro:IPR011009InterPro:IPR013320InterPro:IPR024171KEGG:04150+2.7.11.1
KEGG:04151+2.7.11.1KEGG:ath:AT3G16030PaxDb:Q9LW83Pfam:PF01453
Pfam:PF07714Pfam:PF08276Pfam:Q9LW83Pfscan:PS50011
Pfscan:PS50927Pfscan:PS50948PIRSF:PIRSF000641PRIDE:Q9LW83
PRO:PR:Q9LW83PROSITE:PS00108PROSITE:PS50011PROSITE:PS50927
PROSITE:PS50948ProteinModelPortal:Q9LW83Proteomes:UP000006548RefSeq:NP_188224.1
scanprosite:PS00108SMART:SM00108SMART:SM00220SMR:Q9LW83
STRING:3702.AT3G16030.1SUPFAM:SSF51110SUPFAM:SSF56112TAIR:AT3G16030
tair10-symbols:CES101TMHMM:TMhelixUniGene:At.50186UniProt:Q9LW83
Coordinates (TAIR10) chr3:+:5439609..5442802
Molecular Weight (calculated) 96290.30 Da
IEP (calculated) 7.52
GRAVY (calculated) -0.20
Length 850 amino acids
Sequence (TAIR10)
(BLAST)
001: MWSNCIFLTL FTFYLFLGQS CCQTDTLLQG QYLKDGQELV SAFNIFKLKF FNFENSSNWY LGIWYNNFYL SGAVWIANRN NPVLGRSGSL TVDSLGRLRI
101: LRGASSLLEL SSTETTGNTT LKLLDSGNLQ LQEMDSDGSM KRTLWQSFDY PTDTLLPGMK LGFNVKTGKR WELTSWLGDT LPASGSFVFG MDDNITNRLT
201: ILWLGNVYWA SGLWFKGGFS LEKLNTNGFI FSFVSTESEH YFMYSGDENY GGPLFPRIRI DQQGSLQKIN LDGVKKHVHC SPSVFGEELE YGCYQQNFRN
301: CVPARYKEVT GSWDCSPFGF GYTYTRKTYD LSYCSRFGYT FRETVSPSAE NGFVFNEIGR RLSSYDCYVK CLQNCSCVAY ASTNGDGTGC EIWNTDPTNE
401: NSASHHPRTI YIRIKGSKLA ATWLVVVASL FLIIPVTWLI IYLVLRKFKI KGTNFVSESL KMISSQSCSL TNKRLSTLRV GSTIDQEMLL LELGIERRRR
501: GKRSARNNNN ELQIFSFESV AFATDYFSDA NKLGEGGFGP VYKGRLIDGE EVAIKRLSLA SGQGLVEFKN EAMLIAKLQH TNLVKLLGCC VEKDEKMLIY
601: EYMPNKSLDY FLFDPLRKIV LDWKLRFRIM EGIIQGLLYL HKYSRLKVIH RDIKAGNILL DEDMNPKISD FGMARIFGAQ ESKANTKRVA GTFGYMSPEY
701: FREGLFSAKS DVFSFGVLML EIICGRKNNS FHHDSEGPLN LIVHVWNLFK ENRVREVIDP SLGDSAVENP QVLRCVQVAL LCVQQNADDR PSMLDVVSMI
801: YGDGNNALSL PKEPAFYDGP PRSSPEMEVE PPEMENVSAN RVTITVMEAR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)