AT3G10450.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:extracellular 1.000 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : serine carboxypeptidase-like 7 | ||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
serine carboxypeptidase-like 7 (SCPL7); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 3 (TAIR:AT1G73280.1); Has 3991 Blast hits to 3892 proteins in 459 species: Archae - 0; Bacteria - 494; Metazoa - 641; Fungi - 841; Plants - 1583; Viruses - 0; Other Eukaryotes - 432 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr3:+:3249544..3252320 | ||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 49568.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 5.65 | ||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.30 | ||||||||||||||||||||||||||||||||||||||||||||||||
Length | 437 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MANDYVSTVL LLLSLLIFLS QRTDSASIVK SLPGFDGPLP FELETGYIGV GEEEEVQLFY YFIKSERNPQ EDPLLLWLSG GPGCSSISGL LYENGPVNVK 101: IEVYNGTLPS LVSTTYSWTK VSSIIYLDQP VGTGFSYSRT KLVNKPSDSG EAKRIHEFLH KWLGKHQEFS SNPFYVGGDS YCGMVIPALV QEISKGNYVC 201: CKPPINLQGY ILGNPSTENE VDINYRIPYA HGMALISDEL YESMKRICKG KYENVDPRNT KCLKLVGEYQ KCTKRINKAL IITPECVDTS PDCYMYRYLL 301: TTYWANDENV QRALHVNKGS IGEWVRCYFE IPYNHDIKSS VPYHMNNSID GYASLIFSGD HDMEVPYLGT QAWIRSLNYS LIDDWRPWMI GDQIAGYTRT 401: YANKMAFATI KGGGHTPEYK PEESYIMFQR WISGQPL |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)