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AT3G21790.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31186290 (2019): cytosol None
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : UDP-Glycosyltransferase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 71B8 (TAIR:AT3G21800.1); Has 7258 Blast hits to 7210 proteins in 387 species: Archae - 0; Bacteria - 256; Metazoa - 1953; Fungi - 26; Plants - 4958; Viruses - 11; Other Eukaryotes - 54 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G21790-MONOMERCAZy:GT1EC:2.4.1.-eggNOG:COG1819
eggNOG:KOG1192EMBL:AB025634EMBL:CP002686EnsemblPlants:AT3G21790
EnsemblPlants:AT3G21790.1entrez:821733GeneID:821733Genevisible:Q9LSY5
GO:GO:0016758Gramene:AT3G21790.1gramene_pathway:2.4.1.-gramene_pathway:PWY-5272
hmmpanther:PTHR11926hmmpanther:PTHR11926:SF242HOGENOM:HOG000237568InParanoid:Q9LSY5
InterPro:IPR002213KEGG:ath:AT3G21790OMA:ENDYADSPANTHER:PTHR11926
PaxDb:Q9LSY5Pfam:PF00201Pfam:Q9LSY5PRIDE:Q9LSY5
PRO:PR:Q9LSY5PROSITE:PS00375ProteinModelPortal:Q9LSY5Proteomes:UP000006548
RefSeq:NP_188816.1scanprosite:PS00375SMR:Q9LSY5STRING:3702.AT3G21790.1
SUPFAM:SSF53756TAIR:AT3G21790UniGene:At.65116UniProt:Q9LSY5
Coordinates (TAIR10) chr3:-:7676927..7678414
Molecular Weight (calculated) 55631.00 Da
IEP (calculated) 4.96
GRAVY (calculated) -0.07
Length 495 amino acids
Sequence (TAIR10)
(BLAST)
001: MKFELVFIPY PGIGHLRSTV EMAKLLVDRE TRLSISVIIL PFISEGEVGA SDYIAALSAS SNNRLRYEVI SAVDQPTIEM TTIEIHMKNQ EPKVRSTVAK
101: LLEDYSSKPD SPKIAGFVLD MFCTSMVDVA NEFGFPSYMF YTSSAGILSV TYHVQMLCDE NKYDVSENDY ADSEAVLNFP SLSRPYPVKC LPHALAANMW
201: LPVFVNQARK FREMKGILVN TVAELEPYVL KFLSSSDTPP VYPVGPLLHL ENQRDDSKDE KRLEIIRWLD QQPPSSVVFL CFGSMGGFGE EQVREIAIAL
301: ERSGHRFLWS LRRASPNIFK ELPGEFTNLE EVLPEGFFDR TKDIGKVIGW APQVAVLANP AIGGFVTHCG WNSTLESLWF GVPTAAWPLY AEQKFNAFLM
401: VEELGLAVEI RKYWRGEHLA GLPTATVTAE EIEKAIMCLM EQDSDVRKRV KDMSEKCHVA LMDGGSSRTA LQKFIEEVAK NIVSLDKEFE HVALK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)