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AT2G01320.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : ABC-2 type transporter family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G25620.2); Has 387535 Blast hits to 354405 proteins in 4108 species: Archae - 7090; Bacteria - 308145; Metazoa - 8600; Fungi - 6710; Plants - 5407; Viruses - 19; Other Eukaryotes - 51564 (source: NCBI BLink).
Protein Annotations
eggNOG:COG1131eggNOG:KOG0061EMBL:AC006200EMBL:AF367318
EMBL:AY133617EMBL:CP002685EnsemblPlants:AT2G01320EnsemblPlants:AT2G01320.1
EnsemblPlants:AT2G01320.4entrez:814660ExpressionAtlas:Q9ZU35Gene3D:3.40.50.300
GeneID:814660Genevisible:Q9ZU35GO:GO:0005524GO:GO:0005886
GO:GO:0006810GO:GO:0009507GO:GO:0009941GO:GO:0016021
GO:GO:0016887GO:GO:0042626GO:GO:0055085hmmpanther:PTHR19241
hmmpanther:PTHR19241:SF262HOGENOM:HOG000036994InParanoid:Q9ZU35InterPro:IPR003439
InterPro:IPR003593InterPro:IPR013525InterPro:IPR017871InterPro:IPR027417
iPTMnet:Q9ZU35KEGG:ath:AT2G01320OMA:WYWSTYLPaxDb:Q9ZU35
Pfam:PF00005Pfam:PF01061Pfam:Q9ZU35Pfscan:PS50893
PhylomeDB:Q9ZU35PIR:C84423PRIDE:Q9ZU35PRO:PR:Q9ZU35
PROSITE:PS00211PROSITE:PS50893ProteinModelPortal:Q9ZU35Proteomes:UP000006548
Reactome:R-ATH-917937RefSeq:NP_178241.1RefSeq:NP_849922.1RefSeq:NP_973392.1
scanprosite:PS00211SMART:SM00382SMR:Q9ZU35STRING:3702.AT2G01320.3
SUPFAM:SSF52540TAIR:AT2G01320TMHMM:TMhelixUniGene:At.43048
UniProt:Q9ZU35
Coordinates (TAIR10) chr2:-:154669..158063
Molecular Weight (calculated) 78903.70 Da
IEP (calculated) 5.68
GRAVY (calculated) -0.05
Length 725 amino acids
Sequence (TAIR10)
(BLAST)
001: MAPFGGKSLA DVVSGIGGNG VGGALAAVAA ALLVRLFAGP GIALLPEDEA EDDYAETEDG GGDSIRPVTI RWRNITCSLS DKSSKSVRFL LKNVSGEAKP
101: GRLLAIMGPS GSGKTTLLNV LAGQLSLSPR LHLSGLLEVN GKPSSSKAYK LAFVRQEDLF FSQLTVRETL SFAAELQLPE ISSAEERDEY VNNLLLKLGL
201: VSCADSCVGD AKVRGISGGE KKRLSLACEL IASPSVIFAD EPTTGLDAFQ AEKVMETLQK LAQDGHTVIC SIHQPRGSVY AKFDDIVLLT EGTLVYAGPA
301: GKEPLTYFGN FGFLCPEHVN PAEFLADLIS VDYSSSETVY SSQKRVHALV DAFSQRSSSV LYATPLSMKE ETKNGMRPRR KAIVERTDGW WRQFFLLLKR
401: AWMQASRDGP TNKVRARMSV ASAVIFGSVF WRMGKSQTSI QDRMGLLQVA AINTAMAALT KTVGVFPKER AIVDRERSKG SYSLGPYLLS KTIAEIPIGA
501: AFPLMFGAVL YPMARLNPTL SRFGKFCGIV TVESFAASAM GLTVGAMVPS TEAAMAVGPS LMTVFIVFGG YYVNADNTPI IFRWIPRASL IRWAFQGLCI
601: NEFSGLKFDH QNTFDVQTGE QALERLSFGG RRIRETIAAQ SRILMFWYSA TYLLLEKNKP KYQKLELLVD NGETGNSGVQ LDKAEVDQTE KPEDDDINQP
701: LDDQNQTSDS DDELDEIRPF VLEGL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)