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AT3G53280.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.998
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:26781341 (2016): plasma membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:19334764 (2009): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : cytochrome p450 71b5
Curator
Summary (TAIR10)
cytochrome P450 monooxygenase
Computational
Description (TAIR10)
cytochrome p450 71b5 (CYP71B5); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 38 (TAIR:AT3G44250.1); Has 33134 Blast hits to 32894 proteins in 1695 species: Archae - 47; Bacteria - 3311; Metazoa - 12038; Fungi - 6892; Plants - 9686; Viruses - 3; Other Eukaryotes - 1157 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G53280-MONOMEREC:1.14.-.-eggNOG:COG2124eggNOG:KOG0156
EMBL:AL132958EMBL:CP002686EMBL:D78601EnsemblPlants:AT3G53280
EnsemblPlants:AT3G53280.1entrez:824495Gene3D:1.10.630.10GeneID:824495
Genevisible:O65784GO:GO:0005506GO:GO:0016020GO:GO:0016021
GO:GO:0016709GO:GO:0020037GO:GO:0044550GO:GO:0071281
GO:GO:0071369GO:GO:0071732Gramene:AT3G53280.1hmmpanther:PTHR24298
hmmpanther:PTHR24298:SF86HOGENOM:HOG000218629InParanoid:O65784InterPro:IPR001128
InterPro:IPR002401InterPro:IPR017972iPTMnet:O65784KEGG:ath:AT3G53280
KO:K00517OMA:GSITMIWPaxDb:O65784Pfam:O65784
Pfam:PF00067PhylomeDB:O65784PIR:T46174PRIDE:O65784
PRINTS:PR00385PRINTS:PR00463PRO:PR:O65784PROSITE:PS00086
ProteinModelPortal:O65784Proteomes:UP000006548RefSeq:NP_190896.1scanprosite:PS00086
SMR:O65784STRING:3702.AT3G53280.1SUPFAM:SSF48264TAIR:AT3G53280
tair10-symbols:CYP71B5UniGene:At.335UniGene:At.69523UniProt:O65784
Coordinates (TAIR10) chr3:+:19755749..19757466
Molecular Weight (calculated) 56377.00 Da
IEP (calculated) 7.00
GRAVY (calculated) -0.03
Length 498 amino acids
Sequence (TAIR10)
(BLAST)
001: MSIFLCFLLL LPLSLIFLKK LLPSKGKLPP GPKGLPIIGN LHQFGRFLHK SLHKISQEYG PVMLLHFGVV PVIIVSSKEG AEEVLKTHDL ETCSRPKTVG
101: SGLFTYNFKD IGFAPYGENW REMRKIAVSE LFSQKKLKSF RYIREDESQL LVRKVSKSAL ETPTSSVNLR KVIFTFAASI ICRLSFGQNF CDFVDMETVE
201: ELVLESETNL GSLAFADFLP AGWIIDRISG QHSTVMKAFS KLTNFFELVI DDHLKSGKIE DHSDIISVML DMINKPTEVG SYKVTDDHLK GLMSDVFLAG
301: VNAGSITMIW TMTELSRHPR VMRKLQEEIR AALGPNKEKI TEEDLEKVEY LKMVIEEAFR LHPPAPLLLP RLTMSDINIQ GYSIPKNTMI QINTYTIGRD
401: PKNWTKPDEF IPERFVDNPI EYKGQHFELL PFGAGRRVCP GMATGITIVE LGLLSLLYFF DWSLPNGMTT KDIDMEEDGA FVIAKKVSLE LVPTLHRW
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)