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AT1G64710.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
golgi 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:26781341 (2016): plasma membrane
  • PMID:25900983 (2015): Golgi
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:25641898 (2015): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : GroES-like zinc-binding dehydrogenase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
GroES-like zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: GroES-like zinc-binding dehydrogenase family protein (TAIR:AT1G32780.1); Has 32712 Blast hits to 32690 proteins in 3136 species: Archae - 724; Bacteria - 20870; Metazoa - 1276; Fungi - 2315; Plants - 4127; Viruses - 3; Other Eukaryotes - 3397 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G64710-MONOMERBioCyc:ARA:GQT-1255-MONOMERBioGrid:28000EC:1.1.1.1
eggNOG:COG1062eggNOG:KOG0022EMBL:AC006193EMBL:AY065250
EMBL:BT006064EMBL:CP002684EnsemblPlants:AT1G64710EnsemblPlants:AT1G64710.1
EnsemblPlants:AT1G64710.2entrez:842779ExpressionAtlas:Q8VZ49Gene3D:3.40.50.720
Gene3D:3.90.180.10GeneID:842779Genevisible:Q8VZ49GO:GO:0004022
GO:GO:0005737GO:GO:0008270Gramene:AT1G64710.1gramene_pathway:1.1.1.1
gramene_pathway:1.1.1.22gramene_pathway:ETOH-ACETYLCOA-ANA-PWYgramene_pathway:PWY-3801gramene_pathway:PWY-3821
gramene_pathway:PWY-4821gramene_pathway:PWY-5486gramene_pathway:PWY-6333gramene_pathway:PWY66-21
hmmpanther:PTHR11695hmmpanther:PTHR11695:SF395HOGENOM:HOG000294674InParanoid:Q8VZ49
InterPro:IPR002085InterPro:IPR002328InterPro:IPR011032InterPro:IPR013149
InterPro:IPR013154InterPro:IPR016040PANTHER:PTHR11695PaxDb:Q8VZ49
Pfam:PF00107Pfam:PF08240Pfam:Q8VZ49PhylomeDB:Q8VZ49
PIR:C96670PRIDE:Q8VZ49PRO:PR:Q8VZ49PROSITE:PS00059
ProteinModelPortal:A8MR36ProteinModelPortal:Q8VZ49Proteomes:UP000006548RefSeq:NP_176652.2
scanprosite:PS00059SMR:Q8VZ49STRING:3702.AT1G64710.1SUPFAM:SSF50129
SUPFAM:SSF51735TAIR:AT1G64710UniGene:At.28546UniProt:A8MR36
UniProt:B9DI17UniProt:Q8VZ49
Coordinates (TAIR10) chr1:+:24044638..24046313
Molecular Weight (calculated) 43260.40 Da
IEP (calculated) 6.58
GRAVY (calculated) 0.00
Length 396 amino acids
Sequence (TAIR10)
(BLAST)
001: MQFQLSKPAN NKQRRNMETQ GKVITCKAAV AWGAGEPLVM EDVKVDPPQR LEVRIRILFT SICHTDLSAW KGENEAQRAY PRILGHEAAG IVESVGEGVE
101: EMMAGDHVLP IFTGECGDCR VCKRDGANLC ERFRVDPMKK VMVTDGKTRF FTSKDNKPIY HFLNTSTFSE YTVIDSACVL KVDPLFPLEK ISLLSCGVST
201: GVGAAWNVAD IQPASTVAIF GLGAVGLAVA EGARARGASK IIGIDINPDK FQLGREAGIS EFINPKESDK AVHERVMEIT EGGVEYSFEC AGSIEALREA
301: FLSTNSGVGV TVMLGVHASP QLLPIHPMEL FQGRSITASV FGGFKPKTQL PFFITQCLQG LLNLDLFISH QLPFHDINEA MQLLHQGKAL RCLLHL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)