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AT1G27130.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31186290 (2019): cytosol None
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:26781341 (2016): plasma membrane
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:22215637 (2012): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : glutathione S-transferase tau 13
Curator
Summary (TAIR10)
Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).
Computational
Description (TAIR10)
glutathione S-transferase tau 13 (GSTU13); FUNCTIONS IN: glutathione transferase activity; INVOLVED IN: response to cadmium ion, toxin catabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase tau 14 (TAIR:AT1G27140.1); Has 5143 Blast hits to 5126 proteins in 847 species: Archae - 0; Bacteria - 2240; Metazoa - 360; Fungi - 99; Plants - 1972; Viruses - 0; Other Eukaryotes - 472 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G27130-MONOMEREC:2.5.1.18eggNOG:ENOG410XSIXeggNOG:KOG0406
EMBL:AC000348EMBL:AF288193EMBL:AY044324EMBL:AY050343
EMBL:AY086946EMBL:AY094051EMBL:CP002684EnsemblPlants:AT1G27130
EnsemblPlants:AT1G27130.1entrez:839602Gene3D:1.20.1050.10Gene3D:3.40.30.10
GeneID:839602Genevisible:Q9FUS6GO:GO:0004364GO:GO:0005737
GO:GO:0005829GO:GO:0006749GO:GO:0009407GO:GO:0009636
GO:GO:0046686Gramene:AT1G27130.1hmmpanther:PTHR11260hmmpanther:PTHR11260:SF193
InParanoid:Q9FUS6InterPro:IPR004045InterPro:IPR004046InterPro:IPR010987
InterPro:IPR012336KEGG:ath:AT1G27130KO:K00799OMA:KLMECLA
PaxDb:Q9FUS6Pfam:PF00043Pfam:PF13417Pfam:Q9FUS6
Pfscan:PS50404Pfscan:PS50405PhylomeDB:Q9FUS6PIR:H86397
PRIDE:Q9FUS6PRO:PR:Q9FUS6PROSITE:PS50404PROSITE:PS50405
ProteinModelPortal:Q9FUS6Proteomes:UP000006548RefSeq:NP_174033.1SMR:Q9FUS6
STRING:3702.AT1G27130.1SUPFAM:SSF47616SUPFAM:SSF52833TAIR:AT1G27130
tair10-symbols:ATGSTU13tair10-symbols:GST12tair10-symbols:GSTU13UniGene:At.16269
UniProt:Q9FUS6
Coordinates (TAIR10) chr1:+:9425582..9426597
Molecular Weight (calculated) 25132.20 Da
IEP (calculated) 5.73
GRAVY (calculated) -0.04
Length 227 amino acids
Sequence (TAIR10)
(BLAST)
001: MAQNDTVKLI GSWSSPYSLR ARVALHLKSV KYEYLDEPDV LKEKSELLLK SNPIHKKVPV LLHGDLSISE SLNVVQYVDE AWPSVPSILP SDAYDRASAR
101: FWAQYIDDKC FAAVDAVVGA KDDEGKMAAV GKLMECLAIL EETFQKSSKG LGFFGGETIG YLDIACSALL GPISVIEAFS GVKFLRQETT PGLIKWAERF
201: RAHEAVKPYM PTVEEVVAFA KQKFNVQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)