suba logo
AT3G57770.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
cytosol 0.995
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein kinase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot, stem; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G57700.1); Has 31980 Blast hits to 31686 proteins in 859 species: Archae - 12; Bacteria - 542; Metazoa - 6797; Fungi - 843; Plants - 21680; Viruses - 85; Other Eukaryotes - 2021 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0515eggNOG:KOG1187EMBL:CP002686EnsemblPlants:AT3G57770
EnsemblPlants:AT3G57770.1entrez:824946GeneID:824946GO:GO:0004672
GO:GO:0005524Gramene:AT3G57770.1hmmpanther:PTHR27005hmmpanther:PTHR27005:SF38
InParanoid:F4J3H7InterPro:IPR000719InterPro:IPR001245InterPro:IPR008271
InterPro:IPR011009InterPro:IPR020635KEGG:ath:AT3G57770ncoils:Coil
PaxDb:F4J3H7Pfam:PF07714Pfscan:PS50011PRIDE:F4J3H7
PROSITE:PS00108PROSITE:PS50011ProteinModelPortal:F4J3H7Proteomes:UP000006548
RefSeq:NP_191336.2scanprosite:PS00108SMART:SM00219SMR:F4J3H7
STRING:3702.AT3G57770.1SUPFAM:SSF56112TAIR:AT3G57770UniGene:At.34803
UniProt:F4J3H7
Coordinates (TAIR10) chr3:+:21397542..21398421
Molecular Weight (calculated) 30292.50 Da
IEP (calculated) 6.62
GRAVY (calculated) -0.07
Length 269 amino acids
Sequence (TAIR10)
(BLAST)
001: MAHISDIKLI RTDTTLDLSQ KAEKGMIWTM GGASYLYYNA YDHGSLTCRC GTLLIASSGG KYNPIRTFSS HQILEATNNF DWSYAIGVDR FVWYKGTIEN
101: RAVLIKYYKG EPFNFDPDNF YRDIAVSSMM SSHKNVLKLL GCCLEFPRPV LVCEYPEKGA LAYIGGAGEV IKPLAWSVRL KIAKEIADAV TYLHTEFPRT
201: IIHRDLKLTN IFLDENWTAK LSSFSLSIPI PEGELGVEDI VCGTQGFGEP HYMENMDSIK NRLMVTVIT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)