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AT3G23340.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.995
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : casein kinase I-like 10
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
casein kinase I-like 10 (ckl10); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: casein kinase I (TAIR:AT4G14340.1); Has 56550 Blast hits to 56234 proteins in 2232 species: Archae - 39; Bacteria - 9117; Metazoa - 21673; Fungi - 6267; Plants - 8804; Viruses - 331; Other Eukaryotes - 10319 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G23340-MONOMEReggNOG:ENOG410XPGPeggNOG:KOG1164EMBL:AB015474
EMBL:AY054179EMBL:AY074556EMBL:AY943849EMBL:CP002686
EnsemblPlants:AT3G23340EnsemblPlants:AT3G23340.1entrez:821915GeneID:821915
GO:GO:0004674GO:GO:0005524GO:GO:0016055GO:GO:0018105
Gramene:AT3G23340.1hmmpanther:PTHR11909hmmpanther:PTHR11909:SF178HOGENOM:HOG000182055
IntAct:Q9LW62InterPro:IPR000719InterPro:IPR008271InterPro:IPR011009
InterPro:IPR017441KEGG:ath:AT3G23340OMA:IRPKHIFPfam:PF00069
Pfscan:PS50011PhylomeDB:Q9LW62PROSITE:PS00107PROSITE:PS00108
PROSITE:PS50011Proteomes:UP000006548RefSeq:NP_188976.1scanprosite:PS00107
scanprosite:PS00108SMART:SM00220SMR:Q9LW62STRING:3702.AT3G23340.1
SUPFAM:SSF56112TAIR:AT3G23340tair10-symbols:ckl10UniGene:At.13
UniGene:At.74909UniProt:Q9LW62
Coordinates (TAIR10) chr3:+:8351047..8353791
Molecular Weight (calculated) 50383.50 Da
IEP (calculated) 9.96
GRAVY (calculated) -0.58
Length 442 amino acids
Sequence (TAIR10)
(BLAST)
001: MDHVIGGKFK LGRKIGSGSF GELYIGINVQ TGEEVALKLE PVKTKHPQLH YESKVYMLLQ GGTGVPHIKW FGVEGNYNCM AIDLLGPSLE DLFNYCTRSF
101: SLKTVLMLAD QLINRVEYMH SRGFLHRDIK PDNFLMGLGR KANQVYIIDY GLAKKYRDLQ THKHIPYREN KNLTGTARYA SVNTHLGIEQ SRRDDLESLG
201: YVLMYFIRGS LPWQGLKAGT KKQKYEKISE KKMLTPVEVL CKSYPSEFTS YFHYCRSLRF EDKPDYSYLK RLFRDLFIRE GYQFDYVFDW TILKYPQSGS
301: ISKPRPNPKP ALDPPGPSAE RNEKPIVGQD LRERFSGAVE AFARRNVPSH GIRPKHIFSD DASKEVQVSE KTRNEIATKM AVMSSSQPGS SGELSENRSS
401: KLFSSSAQKI QPVQETKLSA RLGRDDGLRS FDMLTIGSGK RK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)