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AT3G03520.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:22215637 (2012): plasma membrane
  • PMID:21533090 (2011): extracellular region plant-type cell wall
  • PMID:21433285 (2011): plasma membrane
  • PMID:20843791 (2010): plasma membrane
  • PMID:19334764 (2009): plasma membrane
  • PMID:15539469 (2004): plant-type vacuole
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : non-specific phospholipase C3
Curator
Summary (TAIR10)
Lysophosphatidic acid phosphatase highly expressed during phosphate starvation and abiotic stresses. Role in lipid synthesis.
Computational
Description (TAIR10)
non-specific phospholipase C3 (NPC3); FUNCTIONS IN: hydrolase activity, acting on ester bonds, Lysophosphatidic acid phosphatase activity; INVOLVED IN: cellular response to phosphate starvation, phosphate metabolic process, response to abiotic stimulus; LOCATED IN: vacuole, membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoesterase (InterPro:IPR007312); BEST Arabidopsis thaliana protein match is: non-specific phospholipase C4 (TAIR:AT3G03530.1); Has 2235 Blast hits to 2112 proteins in 404 species: Archae - 32; Bacteria - 1866; Metazoa - 0; Fungi - 127; Plants - 159; Viruses - 0; Other Eukaryotes - 51 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G03520-MONOMERBioGrid:6577EC:3.1.-.-eggNOG:COG3511
eggNOG:ENOG410IJCMEMBL:AB084295EMBL:AC009895EMBL:AY065242
EMBL:AY150477EMBL:CP002686EnsemblPlants:AT3G03520EnsemblPlants:AT3G03520.1
entrez:821244GeneID:821244Genevisible:Q9SRQ6GO:GO:0005773
GO:GO:0006796GO:GO:0009506GO:GO:0016020GO:GO:0016036
GO:GO:0016311GO:GO:0052642Gramene:AT3G03520.1hmmpanther:PTHR31956
hmmpanther:PTHR31956:SF1HOGENOM:HOG000192929InParanoid:Q9SRQ6InterPro:IPR007312
KEGG:ath:AT3G03520KO:K01114OMA:QFPPSVLPaxDb:Q9SRQ6
Pfam:PF04185Pfam:Q9SRQ6PhylomeDB:Q9SRQ6PRIDE:Q9SRQ6
PRO:PR:Q9SRQ6ProteinModelPortal:Q9SRQ6Proteomes:UP000006548RefSeq:NP_187002.1
STRING:3702.AT3G03520.1SwissPalm:Q9SRQ6TAIR:AT3G03520tair10-symbols:NPC3
UniGene:At.28551UniProt:Q9SRQ6
Coordinates (TAIR10) chr3:-:837972..840511
Molecular Weight (calculated) 59100.50 Da
IEP (calculated) 5.12
GRAVY (calculated) -0.50
Length 523 amino acids
Sequence (TAIR10)
(BLAST)
001: MVEETSSGGG SSASPIKTIV VLVQENRSFD HMLGWFKELN PEIDGVSESE PRSNPLSTSD PNSAQIFFGK ESQNIDPDPG HSFQAIYEQV FGKPFSDESP
101: YPDPKMNGFV QNAEAITKGM SEKVVMQGFP PEKLPVFKEL VQEFAVCDRW FSSLPSSTQP NRLYVHAATS NGAFSNDTNT LVRGFPQRTV FESLEESGFT
201: FGIYYQSFPN CLFYRNMRKL KYVDNFHQYH LSFKRHCKEG KLPNYVVIEP RYFKILSAPA NDDHPKNDVV EGQNLVKEIY EALRASPQWN EILFVVVYDE
301: HGGYYDHVPT PVIGVPNPDG LVGPEPYNFK FDRLGVRVPA LLISPWIEPG TVLHEPNGPE PTSQFEHSSI PATLKKIFNL KSFLTKRDEW AGTLDAVINR
401: TSPRTDCPVT LPELPRARDI DIGTQEEDED LTDFQIELIQ AAAVLKGDHI KDIYPFKLAD KMKVLDAARY VEEAFTRFHG ESKKAKEEGR DEHEIVDLSK
501: GSTRHSTPKS FVQKLFSCLI CDN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)