suba logo
AT5G20960.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
plasma membrane 0.992
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:24030099 (2013): plasma membrane
  • PMID:19334764 (2009): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : aldehyde oxidase 1
Curator
Summary (TAIR10)
Encodes aldehyde oxidase AA01.
Computational
Description (TAIR10)
aldehyde oxidase 1 (AO1); CONTAINS InterPro DOMAIN/s: Aldehyde oxidase/xanthine dehydrogenase (InterPro:IPR016208), Ferredoxin (InterPro:IPR001041), Molybdopterin dehydrogenase, FAD-binding (InterPro:IPR002346), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), [2Fe-2S]-binding (InterPro:IPR002888), FAD-binding, type 2 (InterPro:IPR016166), CO dehydrogenase flavoprotein, C-terminal (InterPro:IPR005107), 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 (InterPro:IPR016169), Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead (InterPro:IPR000674), Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding (InterPro:IPR008274); BEST Arabidopsis thaliana protein match is: aldehyde oxidase 2 (TAIR:AT3G43600.1); Has 18277 Blast hits to 17619 proteins in 1295 species: Archae - 420; Bacteria - 10771; Metazoa - 1021; Fungi - 121; Plants - 280; Viruses - 0; Other Eukaryotes - 5664 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-975-MONOMERBioCyc:MetaCyc:AT5G20960-MONOMERBioGrid:17496BRENDA:1.2.3.1
EC:1.2.3.7eggNOG:COG4630eggNOG:COG4631eggNOG:KOG0430
EMBL:AB005804EMBL:AF039895EMBL:AF296834EMBL:CP002688
EnsemblPlants:AT5G20960EnsemblPlants:AT5G20960.1EnsemblPlants:AT5G20960.2entrez:832221
Gene3D:1.10.150.120Gene3D:3.10.20.30Gene3D:3.30.365.10Gene3D:3.30.43.10
Gene3D:3.30.465.10Gene3D:3.90.1170.50GeneID:832221Genevisible:Q7G193
GO:GO:0004031GO:GO:0004854GO:GO:0005506GO:GO:0005829
GO:GO:0009055GO:GO:0009115GO:GO:0009688GO:GO:0009851
GO:GO:0016614GO:GO:0050302GO:GO:0050660GO:GO:0051537
Gramene:AT5G20960.1Gramene:AT5G20960.2hmmpanther:PTHR11908hmmpanther:PTHR11908:SF98
HOGENOM:HOG000191197InParanoid:Q7G193IntAct:Q7G193InterPro:IPR000674
InterPro:IPR001041InterPro:IPR002346InterPro:IPR002888InterPro:IPR005107
InterPro:IPR006058InterPro:IPR008274InterPro:IPR012675InterPro:IPR016166
InterPro:IPR016167InterPro:IPR016169InterPro:IPR016208iPTMnet:Q7G193
KEGG:ath:AT5G20960KO:K11817ncoils:CoilOMA:SIVVEVQ
PaxDb:Q7G193Pfam:PF00111Pfam:PF00941Pfam:PF01315
Pfam:PF01799Pfam:PF02738Pfam:PF03450Pfam:Q7G193
Pfscan:PS51085Pfscan:PS51387PhylomeDB:Q7G193PIR:T51622
PIR:T52049PIRSF:PIRSF000127PRIDE:Q7G193PRO:PR:Q7G193
PROSITE:PS00197PROSITE:PS51085PROSITE:PS51387ProteinModelPortal:Q7G193
Proteomes:UP000006548RefSeq:NP_568407.2RefSeq:NP_851049.1SABIO-RK:Q7G193
scanprosite:PS00197SMART:SM01008SMART:SM01092SMR:Q7G193
STRING:3702.AT5G20960.1SUPFAM:SSF47741SUPFAM:SSF54292SUPFAM:SSF54665
SUPFAM:SSF55447SUPFAM:SSF56003SUPFAM:SSF56176TAIR:AT5G20960
tair10-symbols:AAO1tair10-symbols:AO1tair10-symbols:AOalphatair10-symbols:AT-AO1
tair10-symbols:ATAOtair10-symbols:AtAO1UniGene:At.19954UniProt:Q7G193
Coordinates (TAIR10) chr5:+:7116783..7122338
Molecular Weight (calculated) 149563.00 Da
IEP (calculated) 6.34
GRAVY (calculated) -0.11
Length 1368 amino acids
Sequence (TAIR10)
(BLAST)
0001: MGEKAIDEDK VEAMKSSKTS LVFAINGQRF ELELSSIDPS TTLVDFLRNK TPFKSVKLGC GEGGCGACVV LLSKYDPLLE KVDEFTISSC LTLLCSIDGC
0101: SITTSDGLGN SRVGFHAVHE RIAGFHATQC GFCTPGMSVS MFSALLNADK SHPPPRSGFS NLTAVEAEKA VSGNLCRCTG YRPLVDACKS FAADVDIEDL
0201: GFNAFCKKGE NRDEVLRRLP CYDHTSSHVC TFPEFLKKEI KNDMSLHSRK YRWSSPVSVS ELQGLLEVEN GLSVKLVAGN TSTGYYKEEK ERKYERFIDI
0301: RKIPEFTMVR SDEKGVELGA CVTISKAIEV LREEKNVSVL AKIATHMEKI ANRFVRNTGT IGGNIMMAQR KQFPSDLATI LVAAQATVKI MTSSSSQEQF
0401: TLEEFLQQPP LDAKSLLLSL EIPSWHSAKK NGSSEDSILL FETYRAAPRP LGNALAFLNA AFSAEVTEAL DGIVVNDCQL VFGAYGTKHA HRAKKVEEFL
0501: TGKVISDEVL MEAISLLKDE IVPDKGTSNP GYRSSLAVTF LFEFFGSLTK KNAKTTNGWL NGGCKEIGFD QNVESLKPEA MLSSAQQIVE NQEHSPVGKG
0601: ITKAGACLQA SGEAVYVDDI PAPENCLYGA FIYSTMPLAR IKGIRFKQNR VPEGVLGIIT YKDIPKGGQN IGTNGFFTSD LLFAEEVTHC AGQIIAFLVA
0701: DSQKHADIAA NLVVIDYDTK DLKPPILSLE EAVENFSLFE VPPPLRGYPV GDITKGMDEA EHKILGSKIS FGSQYFFYME TQTALAVPDE DNCMVVYSST
0801: QTPEFVHQTI AGCLGVPENN VRVITRRVGG GFGGKAVKSM PVAAACALAA SKMQRPVRTY VNRKTDMITT GGRHPMKVTY SVGFKSNGKI TALDVEVLLD
0901: AGLTEDISPL MPKGIQGALM KYDWGALSFN VKVCKTNTVS RTALRAPGDV QGSYIGEAII EKVASYLSVD VDEIRKVNLH TYESLRLFHS AKAGEFSEYT
1001: LPLLWDRIDE FSGFNKRRKV VEEFNASNKW RKRGISRVPA VYAVNMRSTP GRVSVLGDGS IVVEVQGIEI GQGLWTKVKQ MAAYSLGLIQ CGTTSDELLK
1101: KIRVIQSDTL SMVQGSMTAG STTSEASSEA VRICCDGLVE RLLPVKTALV EQTGGPVTWD SLISQAYQQS INMSVSSKYM PDSTGEYLNY GIAASEVEVN
1201: VLTGETTILR TDIIYDCGKS LNPAVDLGQI EGAFVQGLGF FMLEEFLMNS DGLVVTDSTW TYKIPTVDTI PRQFNVEILN SGQHKNRVLS SKASGEPPLL
1301: LAASVHCAVR AAVKEARKQI LSWNSNKQGT DMYFELPVPA TMPIVKEFCG LDVVEKYLEW KIQQRKNV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)