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AT5G44790.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
golgi 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:25900983 (2015): Golgi
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25122472 (2014): Golgi Golgi apparatus
  • PMID:24344820 (2014): Golgi trans-Golgi network
  • PMID:24134884 (2013): cytoskeleton microtubules
  • PMID:22923678 (2012): Golgi
  • PMID:21826108 (2012): Golgi trans-Golgi network multivesicular body
  • PMID:21433285 (2011): plasma membrane
  • PMID:16618929 (2006): Golgi
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : copper-exporting ATPase / responsive-to-antagonist 1 / copper-transporting ATPase (RAN1)
Curator
Summary (TAIR10)
ATP dependent copper transporter vital for ethylene response pathway
Computational
Description (TAIR10)
RESPONSIVE-TO-ANTAGONIST 1 (RAN1); CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121), ATPase, P type, cation/copper-transporter (InterPro:IPR006403), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), Heavy-metal-associated, conserved site (InterPro:IPR017969), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, heavy metal translocating (InterPro:IPR006416), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), Copper ion-binding (InterPro:IPR006122), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: heavy metal atpase 5 (TAIR:AT1G63440.1); Has 47831 Blast hits to 34622 proteins in 3461 species: Archae - 1084; Bacteria - 31583; Metazoa - 5562; Fungi - 2713; Plants - 1975; Viruses - 3; Other Eukaryotes - 4911 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G44790-MONOMERBioGrid:19759EC:3.6.3.54eggNOG:COG2217
eggNOG:KOG0207EMBL:AB016874EMBL:AC002342EMBL:AF082565
EMBL:AF091112EMBL:CP002688EnsemblPlants:AT5G44790EnsemblPlants:AT5G44790.1
entrez:834509EvolutionaryTrace:Q9S7J8Gene3D:2.70.150.10Gene3D:3.40.1110.10
Gene3D:3.40.50.1000GeneID:834509Genevisible:Q9S7J8GO:GO:0005507
GO:GO:0005524GO:GO:0005768GO:GO:0005794GO:GO:0005802
GO:GO:0005887GO:GO:0009723GO:GO:0009873GO:GO:0010119
GO:GO:0035434GO:GO:0043682Gramene:AT5G44790.1hmmpanther:PTHR24093
hmmpanther:PTHR24093:SF360HOGENOM:HOG000250397InParanoid:Q9S7J8IntAct:Q9S7J8
InterPro:IPR001757InterPro:IPR006121InterPro:IPR006122InterPro:IPR008250
InterPro:IPR017969InterPro:IPR018303InterPro:IPR023214InterPro:IPR023299
InterPro:IPR027256KEGG:ath:AT5G44790KO:K17686MINT:MINT-8066708
OMA:NEKMILVPaxDb:Q9S7J8PDB:3DXSPDBsum:3DXS
Pfam:PF00122Pfam:PF00403Pfam:PF00702Pfam:Q9S7J8
Pfscan:PS50846PhylomeDB:Q9S7J8PRIDE:Q9S7J8PRO:PR:Q9S7J8
PROSITE:PS00154PROSITE:PS01047PROSITE:PS50846ProteinModelPortal:Q9S7J8
Proteomes:UP000006548Reactome:R-ATH-936837RefSeq:NP_199292.1scanprosite:PS00154
scanprosite:PS01047SMR:Q9S7J8STRING:3702.AT5G44790.1SUPFAM:0049471
SUPFAM:0049473SUPFAM:SSF55008SUPFAM:SSF56784SwissPalm:Q9S7J8
TAIR:AT5G44790tair10-symbols:HMA7tair10-symbols:RAN1TCDB:3.A.3.5.32
TIGRfam:TIGR00003TIGRfam:TIGR01494TIGRfam:TIGR01525TIGRFAMs:TIGR00003
TIGRFAMs:TIGR01494TIGRFAMs:TIGR01525TMHMM:TMhelixUniGene:At.24482
UniProt:Q9S7J8
Coordinates (TAIR10) chr5:-:18075846..18079817
Molecular Weight (calculated) 107401.00 Da
IEP (calculated) 4.81
GRAVY (calculated) 0.23
Length 1001 amino acids
Sequence (TAIR10)
(BLAST)
0001: MAPSRRDLQL TPVTGGSSSQ ISDMEEVGLL DSYHNEANAD DILTKIEEGR DVSGLRKIQV GVTGMTCAAC SNSVEAALMN VNGVFKASVA LLQNRADVVF
0101: DPNLVKEEDI KEAIEDAGFE AEILAEEQTQ ATLVGQFTIG GMTCAACVNS VEGILRDLPG VKRAVVALST SLGEVEYDPN VINKDDIVNA IEDAGFEGSL
0201: VQSNQQDKLV LRVDGILNEL DAQVLEGILT RLNGVRQFRL DRISGELEVV FDPEVVSSRS LVDGIEEDGF GKFKLRVMSP YERLSSKDTG EASNMFRRFI
0301: SSLVLSIPLF FIQVICPHIA LFDALLVWRC GPFMMGDWLK WALVSVIQFV IGKRFYVAAW RALRNGSTNM DVLVALGTSA SYFYSVGALL YGAVTGFWSP
0401: TYFDASAMLI TFVLLGKYLE SLAKGKTSDA MKKLVQLTPA TAILLTEGKG GKLVGEREID ALLIQPGDTL KVHPGAKIPA DGVVVWGSSY VNESMVTGES
0501: VPVSKEVDSP VIGGTINMHG ALHMKATKVG SDAVLSQIIS LVETAQMSKA PIQKFADYVA SIFVPVVITL ALFTLVGWSI GGAVGAYPDE WLPENGTHFV
0601: FSLMFSISVV VIACPCALGL ATPTAVMVAT GVGATNGVLI KGGDALEKAH KVKYVIFDKT GTLTQGKATV TTTKVFSEMD RGEFLTLVAS AEASSEHPLA
0701: KAIVAYARHF HFFDESTEDG ETNNKDLQNS GWLLDTSDFS ALPGKGIQCL VNEKMILVGN RKLMSENAIN IPDHVEKFVE DLEESGKTGV IVAYNGKLVG
0801: VMGIADPLKR EAALVVEGLL RMGVRPIMVT GDNWRTARAV AKEVGIEDVR AEVMPAGKAD VIRSLQKDGS TVAMVGDGIN DSPALAAADV GMAIGAGTDV
0901: AIEAADYVLM RNNLEDVITA IDLSRKTLTR IRLNYVFAMA YNVVSIPIAA GVFFPVLRVQ LPPWAAGACM ALSSVSVVCS SLLLRRYKKP RLTTVLKITT
1001: E
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)