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AT4G29380.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.994
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : protein kinase family protein / WD-40 repeat family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
protein kinase family protein / WD-40 repeat family protein; FUNCTIONS IN: protein serine/threonine kinase activity, binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), WD40 repeat 2 (InterPro:IPR019782), Armadillo-like helical (InterPro:IPR011989), WD40 repeat (InterPro:IPR001680), HEAT, type 2 (InterPro:IPR021133), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), WD40 repeat-like-containing domain (InterPro:IPR011046), Protein kinase, catalytic domain (InterPro:IPR000719), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Armadillo-type fold (InterPro:IPR016024), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G33770.1); Has 29441 Blast hits to 28057 proteins in 1177 species: Archae - 18; Bacteria - 2884; Metazoa - 11045; Fungi - 5111; Plants - 4360; Viruses - 46; Other Eukaryotes - 5977 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G29380-MONOMEReggNOG:ENOG410XPDNeggNOG:KOG1240EMBL:AL161574
EMBL:CP002687EnsemblPlants:AT4G29380EnsemblPlants:AT4G29380.1entrez:829059
Gene3D:1.25.10.10Gene3D:2.130.10.10GeneID:829059GO:GO:0004674
GO:GO:0005524GO:GO:0005643GO:GO:0005737GO:GO:0005770
GO:GO:0006468GO:GO:0006623GO:GO:0009555GO:GO:0009846
GO:GO:0016236GO:GO:0030242GO:GO:0034271GO:GO:0034272
GO:GO:0045324GO:GO:0071561GO:GO:0080008Gramene:AT4G29380.1
hmmpanther:PTHR17583HOGENOM:HOG000030331InterPro:IPR000357InterPro:IPR000719
InterPro:IPR001680InterPro:IPR008271InterPro:IPR011009InterPro:IPR011989
InterPro:IPR015943InterPro:IPR016024InterPro:IPR017986InterPro:IPR021133
KEGG:ath:AT4G29380KO:K08333ncoils:CoilOMA:FQDIHHF
Pfam:PF00069Pfam:PF00400Pfam:PF02985Pfscan:PS50011
Pfscan:PS50077Pfscan:PS50082Pfscan:PS50294PhylomeDB:Q9M0E5
PROSITE:PS00108PROSITE:PS50011PROSITE:PS50077PROSITE:PS50082
PROSITE:PS50294Proteomes:UP000006548Reactome:R-ATH-1632852Reactome:R-ATH-1660514
Reactome:R-ATH-1660516Reactome:R-ATH-1660517Reactome:R-ATH-5668599RefSeq:NP_194667.1
scanprosite:PS00108SMART:SM00220SMART:SM00320SMR:Q9M0E5
STRING:3702.AT4G29380.1SUPFAM:SSF48371SUPFAM:SSF50978SUPFAM:SSF56112
TAIR:AT4G29380UniGene:At.27874UniProt:Q9M0E5
Coordinates (TAIR10) chr4:+:14458822..14464692
Molecular Weight (calculated) 168133.00 Da
IEP (calculated) 7.06
GRAVY (calculated) -0.24
Length 1494 amino acids
Sequence (TAIR10)
(BLAST)
0001: MGNKIARTTQ VSATEYYLHD LPSSYNLVLK EVLGRGRFLK SIQCKHDEGL VVVKVYFKRG DSIDLREYER RLVKIKDVFL SLEHPHVWPF QFWQETDKAA
0101: YLVRQYFYSN LHDRLSTRPF LSLVEKKWLA FQLLLAVKQC HEKDICHGDI KCENVLLTSW NWLYLADFAS FKPTYIPYDD PSDFSFFFDT RGQRLCYLAP
0201: ERFYEHGGET QVAQDAPLKP SMDIFAVGCV IAELFLEGQP LFELAQLLAY RRGQHDPSQH LEKIPDPGIR KMILHMIQLE PEARLSAEDY LQNYVGVVFP
0301: NYFSPFLHTL YCCWNPLPSD MRVATCQGIF QEILKKMMEN KSGDEIGVDS PVTSNPMNAS TVQETFANHK LNSSKDLIRN TVNSKDEIFY SISDALKKNR
0401: HPFLKKITMD DLGTLMSLYD SRSDTYGTPF LPVEGNMRCE GMVLIASMLC SCIRNIKLPH LRREAILLLR SCSLYIDDDD RLQRVLPYVV ALLSDPTAIV
0501: RCAAMETLCD ILPLVRDFPP SDAKIFPEYI FPMLSMLPED TEESVRICYA SNIAKLALTA YGFLIHSFQL SDVGVLNELN SQQISTTPAS ETPSHLQKAN
0601: GNAQLQQLRK TIAEVVQELV MGPKQTPNVR RALLQDIGEL CFFFGQRQSN DFLLPILPAF LNDRDEQLRS VFFEKIVYVC FFVGQRSVEE YLLPYIDQAL
0701: SDQTEAVIVN ALECLSTLCK SSFLRKRALL QMIECVYPLL CYPSQWVRRA VVTFIAASSE CLGAVDSYAF IAPVIRSYLS RLPASIASEE GLLSCLKPPV
0801: TREVVYRIFE KTRNPEFMAK QRKMWYSSSP QSKDWESVDL FDKDAGELNS VECRAEQKQS VEGKKQIKSA SKQPEVQGKY AEKDAKLRIP RNPRPNASNT
0901: VELRDPVYPE KLQFSGFMAP YVSGANSFIE PENIPLYSFS MDKRAATNPP VASESSLQMN SLGMGSLSVP WMDSMSKSFN LASSVPVPKL ISGSFHVGTN
1001: PKQFYRVVHE PESRENDQIS SAISKFQDLG VSSSSKSASV TSEDASSPAD LVGEPSLSRT SVPDSGWKPR GVLVAHLQEH RSAVNDIATS SDHSFFVSAS
1101: DDSTVKVWDS RKLEKDISFR SRLTYHLEGS RGMCTTMLRN STQVVVGASD GVIHMFSIDH ISRGLGNVVE KYSGIVDIKK KDVKEGALVS LLNYTADSLS
1201: GPMVMYSTQN CGIHLWDTRS DLDAWTLKAN PEEGYVSSLV TSPCGNWFVS GSSRGVLTLW DLRFRVPVNS WQYPIICPIE KMCLCFLPPS VSVSTTMKPL
1301: IYVAAGCNEV SLWNAEGGSC HQVLRVANYE NETDVSEFQW KLPSNKVNPK PNHRQNMSSK YRIEELNEPP PRLPGIRSLL PLPGGDLLTG GTDLKIRRWD
1401: YSSPERSYCI CGPSLKGVGN DDFYELKTNT GVQFVQETKR RPLATKLTAK AVLAAAATDT AGCHRDSVQS LASVKLNQRL LISSSRDGAI KVWK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)