AT1G56145.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Leucine-rich repeat transmembrane protein kinase | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Leucine-rich repeat transmembrane protein kinase; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Malectin/receptor-like protein kinase (InterPro:IPR021720), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT1G56130.1); Has 180803 Blast hits to 131143 proteins in 4771 species: Archae - 130; Bacteria - 16239; Metazoa - 49375; Fungi - 10476; Plants - 82370; Viruses - 418; Other Eukaryotes - 21795 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:21008225..21013934 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 111797.00 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.26 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.10 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 1012 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MLRLILSLVV WFVFMSGLFH VVRSQNRTTA TTDPDEARAL NKIFRTWKIT ATKAWNISGE LCSGAAIDDS VSIDNLAFNP LIKCDCSFVD STICRIVALR 0101: ARGMDVAGPI PDDLWTLVYI SNLNLNQNFL TGPLSPGIGN LTRMQWMTFG ANALSGPVPK EIGLLTDLRS LAIDMNNFSG SLPPEIGNCT RLVKMYIGSS 0201: GLSGEIPSSF ANFVNLEEAW INDIRLTGQI PDFIGNWTKL TTLRILGTSL SGPIPSTFAN LISLTELRLG EISNISSSLQ FIREMKSISV LVLRNNNLTG 0301: TIPSNIGDYL GLRQLDLSFN KLTGQIPAPL FNSRQLTHLF LGNNRLNGSL PTQKSPSLSN IDVSYNDLTG DLPSWVRLPN LQLNLIANHF TVGGSNRRAL 0401: PRLDCLQKDF RCNRGKGVYF NFFVNCGGRD IRSSSGALYE KDEGALGPAT FFVSKTQRWA VSNVGLFTGS NSNQYIALSA TQFANTSDSE LFQSARLSAS 0501: SLRYYGLGLE NGGYSVTVQF AEIQIQGSNT WKSLGRRIFD IYVQGKLVEK DFDMQKAANG SSIRVIQRVY KANVSENYLE VHLFWAGKGT CCIPAQGTYG 0601: PLVSAISATP DFIPTVKNKL PSKSKKNIVI IVGAIVGAGM LCILVIAILL FIRRKRKRAA DEEVLNSLHI RPYTFSYSEL RTATQDFDPS NKLGEGGFGP 0701: VFKGKLNDGR EIAVKQLSVA SRQGKGQFVA EIATISAVQH RNLVKLYGCC IEGNQRMLVY EYLSNKSLDQ ALFEEKSLQL GWSQRFEICL GVAKGLAYMH 0801: EESNPRIVHR DVKASNILLD SDLVPKLSDF GLAKLYDDKK THISTRVAGT IGYLSPEYVM LGHLTEKTDV FAFGIVALEI VSGRPNSSPE LDDDKQYLLE 0901: WAWSLHQEQR DMEVVDPDLT EFDKEEVKRV IGVAFLCTQT DHAIRPTMSR VVGMLTGDVE ITEANAKPGY VSERTFENAM SFMSGSTSSS WILPETPKDS 1001: SKSQVEEHGR RH |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)