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AT1G02390.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 0.950
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : glycerol-3-phosphate acyltransferase 2
Curator
Summary (TAIR10)
Encodes a member of a family of proteins with glycerol-3-phosphate acyltransferase activity.
Computational
Description (TAIR10)
glycerol-3-phosphate acyltransferase 2 (GPAT2); FUNCTIONS IN: acyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: glycerol-3-phosphate acyltransferase 3 (TAIR:AT4G01950.1); Has 367 Blast hits to 357 proteins in 22 species: Archae - 0; Bacteria - 2; Metazoa - 4; Fungi - 0; Plants - 361; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G02390-MONOMEREC:2.3.1.15eggNOG:ENOG410IH7SeggNOG:ENOG410YBBE
EMBL:AC064879EMBL:AF419560EMBL:AY097339EMBL:CP002684
EnsemblPlants:AT1G02390EnsemblPlants:AT1G02390.1entrez:839558GeneID:839558
Genevisible:Q9FZ22GO:GO:0004366GO:GO:0010143GO:GO:0016020
GO:GO:0016021GO:GO:0016024GO:GO:0016311GO:GO:0016791
GO:GO:0090447Gramene:AT1G02390.1gramene_pathway:2.3.1.51gramene_pathway:PWY-5667
gramene_pathway:PWY0-1319gramene_pathway:TRIGLSYN-PWYhmmpanther:PTHR15486hmmpanther:PTHR15486:SF18
HOGENOM:HOG000237722InParanoid:Q9FZ22InterPro:IPR002123KEGG:ath:AT1G02390
KO:K13508OMA:HVQHEIGPaxDb:Q9FZ22Pfam:PF01553
Pfam:Q9FZ22PhylomeDB:Q9FZ22PIR:C86154PRIDE:Q9FZ22
PRO:PR:Q9FZ22ProteinModelPortal:Q9FZ22Proteomes:UP000006548RefSeq:NP_563651.1
SMART:SM00563STRING:3702.AT1G02390.1SUPFAM:0039877TAIR:AT1G02390
tair10-symbols:ATGPAT2tair10-symbols:GPAT2TMHMM:TMhelixUniGene:At.27394
UniPathway:UPA00557UniProt:Q9FZ22
Coordinates (TAIR10) chr1:+:480921..483163
Molecular Weight (calculated) 59971.50 Da
IEP (calculated) 9.78
GRAVY (calculated) 0.07
Length 530 amino acids
Sequence (TAIR10)
(BLAST)
001: MSGNKISTLQ ALVFFLYRFF ILRRWCHRSP KQKYQKCPSH GLHQYQDLSN HTLIFNVEGA LLKSNSLFPY FMVVAFEAGG VIRSLFLLVL YPFISLMSYE
101: MGLKTMVMLS FFGVKKESFR VGKSVLPKYF LEDVGLEMFQ VLKRGGKRVA VSDLPQVMID VFLRDYLEIE VVVGRDMKMV GGYYLGIVED KKNLEIAFDK
201: VVQEERLGSG RRLIGITSFN SPSHRSLFSQ FCQEIYFVRN SDKKSWQTLP QDQYPKPLIF HDGRLAVKPT PLNTLVLFMW APFAAVLAAA RLVFGLNLPY
301: SLANPFLAFS GIHLTLTVNN HNDLISADRK RGCLFVCNHR TLLDPLYISY ALRKKNMKAV TYSLSRLSEL LAPIKTVRLT RDRVKDGQAM EKLLSQGDLV
401: VCPEGTTCRE PYLLRFSPLF SEVCDVIVPV AIDSHVTFFY GTTASGLKAF DPIFFLLNPF PSYTVKLLDP VSGSSSSTCR GVPDNGKVNF EVANHVQHEI
501: GNALGFECTN LTRRDKYLIL AGNNGVVKKK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)