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AT3G50760.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
golgi 0.543
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : galacturonosyltransferase-like 2
Curator
Summary (TAIR10)
Encodes a protein with putative galacturonosyltransferase activity.
Computational
Description (TAIR10)
galacturonosyltransferase-like 2 (GATL2); FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT1G19300.1); Has 1885 Blast hits to 1878 proteins in 434 species: Archae - 2; Bacteria - 935; Metazoa - 151; Fungi - 0; Plants - 716; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink).
Protein Annotations
BioGrid:9558CAZy:GT8EC:2.4.1.-eggNOG:ENOG410IK1V
eggNOG:ENOG41106K3EMBL:AK221498EMBL:AL049862EMBL:AL132979
EMBL:BT011742EMBL:CP002686EnsemblPlants:AT3G50760EnsemblPlants:AT3G50760.1
entrez:824240ExpressionAtlas:Q9S7G2Gene3D:3.90.550.10GeneID:824240
Genevisible:Q9S7G2GO:GO:0000139GO:GO:0000271GO:GO:0005794
GO:GO:0016021GO:GO:0016757GO:GO:0045489GO:GO:0047262
GO:GO:0071555Gramene:AT3G50760.1hmmpanther:PTHR13778hmmpanther:PTHR13778:SF15
HOGENOM:HOG000239469InParanoid:Q9S7G2InterPro:IPR002495InterPro:IPR029044
KEGG:ath:AT3G50760OMA:IIEWMELPaxDb:Q9S7G2Pfam:PF01501
Pfam:Q9S7G2PhylomeDB:Q9S7G2PIR:T46153PRIDE:Q9S7G2
PRO:PR:Q9S7G2ProteinModelPortal:Q9S7G2Proteomes:UP000006548RefSeq:NP_190645.3
SMR:Q9S7G2STRING:3702.AT3G50760.1SUPFAM:SSF53448TAIR:AT3G50760
tair10-symbols:GATL2TMHMM:TMhelixUniGene:At.43015UniPathway:UPA00845
UniProt:Q9S7G2UniProt:W8QNK5
Coordinates (TAIR10) chr3:+:18868074..18869099
Molecular Weight (calculated) 38776.70 Da
IEP (calculated) 7.03
GRAVY (calculated) 0.04
Length 341 amino acids
Sequence (TAIR10)
(BLAST)
001: MHSKFILYLS ILAVFTVSFA GGERFKEAPK FFNSPECLTI ENDEDFVCSD KAIHVAMTLD TAYLRGSMAV ILSVLQHSSC PQNIVFHFVT SKQSHRLQNY
101: VVASFPYLKF RIYPYDVAAI SGLISTSIRS ALDSPLNYAR NYLADILPTC LSRVVYLDSD LILVDDISKL FSTHIPTDVV LAAPEYCNAN FTTYFTPTFW
201: SNPSLSITLS LNRRATPCYF NTGVMVIELK KWREGDYTRK IIEWMELQKR IRIYELGSLP PFLLVFAGNI APVDHRWNQH GLGGDNFRGL CRDLHPGPVS
301: LLHWSGKGKP WVRLDDGRPC PLDALWVPYD LLESRFDLIE S
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)