AT1G68470.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.963 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Exostosin family protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT2G20370.1); Has 782 Blast hits to 782 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 758; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:25676545..25678267 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 52907.50 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.03 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.38 | ||||||||||||||||||||||||||||||||
| Length | 455 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MTFNKRQVKI NHWPEKNDKE KQKYSKNRET VKLTLLTLLL LCSICFLFLT LNFPFTIEFT ASIPRTCDHN FTVYVYDLPK EFNIGLLQNC RHLNIYTNMC 101: PHVANNGLGQ PLHRGRTSWF STHQFIAEMI FHARVENHPC RTYEPDTADI FYVPFYGGLY ASSVFREQNL TKRDELAVRL VNYISGQRWW KRSNGRDHFL 201: AIGRTAWDFM RSSDTDFGAN MLMQMPRVMN MSVLTVERQP WNGDNHFGIP YPSYFHPYTS AEMVTWQDKM KNVERPNLFS FVGGPRKGLE KAAIRDELIK 301: QCAESSHCEL LKCENGGSRC HNPMTVLGVM ARSRFCLQAP GDSFTRRSTF DAMLAGCIPV FFSPHTMYTQ YMWYLPDDKR SYSVFMDEKN NTHIEQELLR 401: ISENEVVQMR EIVIDLIPRL TYAHPNSTNY DLPDAVDIAL EALAKQARDN VVVSL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)