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AT4G01950.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 0.547
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : glycerol-3-phosphate acyltransferase 3
Curator
Summary (TAIR10)
Encodes a member of a family of proteins with glycerol-3-phosphate acyltransferase activity.
Computational
Description (TAIR10)
glycerol-3-phosphate acyltransferase 3 (GPAT3); FUNCTIONS IN: acyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: glycerol-3-phosphate acyltransferase 2 (TAIR:AT1G02390.1); Has 384 Blast hits to 371 proteins in 23 species: Archae - 0; Bacteria - 2; Metazoa - 11; Fungi - 0; Plants - 371; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G01950-MONOMEREC:2.3.1.15eggNOG:ENOG410IH7SeggNOG:ENOG410YBBE
EMBL:AC007138EMBL:AL161493EMBL:AY094395EMBL:AY149949
EMBL:CP002687EnsemblPlants:AT4G01950EnsemblPlants:AT4G01950.1entrez:827165
GeneID:827165Genevisible:Q9SYJ2GO:GO:0004366GO:GO:0010143
GO:GO:0016020GO:GO:0016021GO:GO:0016024GO:GO:0016311
GO:GO:0016791GO:GO:0090447Gramene:AT4G01950.1gramene_pathway:2.3.1.51
gramene_pathway:PWY-5667gramene_pathway:PWY0-1319gramene_pathway:TRIGLSYN-PWYhmmpanther:PTHR15486
hmmpanther:PTHR15486:SF18HOGENOM:HOG000237722InParanoid:Q9SYJ2InterPro:IPR002123
KEGG:ath:AT4G01950KO:K13508OMA:MARSINNPaxDb:Q9SYJ2
Pfam:PF01553Pfam:Q9SYJ2PhylomeDB:Q9SYJ2PIR:A85025
PRIDE:Q9SYJ2PRO:PR:Q9SYJ2ProteinModelPortal:Q9SYJ2Proteomes:UP000006548
RefSeq:NP_192104.1SMART:SM00563STRING:3702.AT4G01950.1SUPFAM:0039877
TAIR:AT4G01950tair10-symbols:ATGPAT3tair10-symbols:GPAT3TMHMM:TMhelix
UniGene:At.34350UniGene:At.74228UniPathway:UPA00557UniProt:Q9SYJ2
Coordinates (TAIR10) chr4:-:844597..846710
Molecular Weight (calculated) 58765.30 Da
IEP (calculated) 9.70
GRAVY (calculated) 0.12
Length 520 amino acids
Sequence (TAIR10)
(BLAST)
001: MSAKISIFQA LVFLFYRFIL RRYRNSKPKY QNGPSSLLQS DLSRHTLIFN VEGALLKSDS LFPYFMLVAF EAGGVIRSFL LFILYPLISL MSHEMGVKVM
101: VMVSFFGIKK EGFRAGRAVL PKYFLEDVGL EMFEVLKRGG KKIGVSDDLP QVMIEGFLRD YLEIDVVVGR EMKVVGGYYL GIMEDKTKHD LVFDELVRKE
201: RLNTGRVIGI TSFNTSLHRY LFSQFCQEIY FVKKSDKRSW QTLPRSQYPK PLIFHDGRLA IKPTLMNTLV LFMWGPFAAA AAAARLFVSL CIPYSLSIPI
301: LAFSGCRLTV TNDYVSSQKQ KPSQRKGCLF VCNHRTLLDP LYVAFALRKK NIKTVTYSLS RVSEILAPIK TVRLTRDRVS DGQAMEKLLT EGDLVVCPEG
401: TTCREPYLLR FSPLFTEVSD VIVPVAVTVH VTFFYGTTAS GLKALDPLFF LLDPYPTYTI QFLDPVSGAT CQDPDGKLKF EVANNVQSDI GKALDFECTS
501: LTRKDKYLIL AGNNGVVKKN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)