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AT5G50890.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.940
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : alpha/beta-Hydrolases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
alpha/beta-Hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G05260.1); Has 209 Blast hits to 209 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 209; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
DNASU:835161eggNOG:ENOG410IFAKeggNOG:ENOG410ZGZNEMBL:AB017063
EMBL:CP002688EnsemblPlants:AT5G50890EnsemblPlants:AT5G50890.1entrez:835161
ESTHER:arath-Q9FI59Gene3D:3.40.50.1820GeneID:835161Gramene:AT5G50890.1
hmmpanther:PTHR31479hmmpanther:PTHR31479:SF3HOGENOM:HOG000238146InterPro:IPR029058
KEGG:ath:AT5G50890OMA:MSEKASYPhylomeDB:Q9FI59Proteomes:UP000006548
RefSeq:NP_199902.1STRING:3702.AT5G50890.1SUPFAM:SSF53474TAIR:AT5G50890
UniGene:At.55476UniProt:Q9FI59
Coordinates (TAIR10) chr5:+:20702684..20704235
Molecular Weight (calculated) 45770.50 Da
IEP (calculated) 8.57
GRAVY (calculated) -0.35
Length 408 amino acids
Sequence (TAIR10)
(BLAST)
001: MAANRVAMEE DITESVTLMV DSVSSSPMTP KTVTVKEDET HHPYAFHVSG PRNVASPNWR DLINSSWKDP NYKRTVMACF IQAAYLLELD RQENRNEQNA
101: LAPKWWIPFK YKLSQTLIDE RDGSIFGAVL EWDRAAAMAD LVVIRPSGAP KAVLALRGTI LKSLTMRRDI EDDLRFLAWE SLKGSVRFNV ALEALQSVAT
201: RYGSSNVCVV GHSLGAGFAL QVGKSLAKEG LFVDAHLFNP PSISVAMSLR NISEKAGVAW KRLMSMLPPK HEPLIQNSNE GQVSPSNVSS GFRNWVPSFY
301: GSNQKPTVDL RKWVPHLYVN DSDYICCHYT DQDGVAEKRE MNNKENNSPV VNTNFQAAAK LFVMSKGKQK FHEAHGLEQW WSDNLELQSA IHSSRLISQQ
401: LKSLYSIK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)