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AT5G49950.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.482
vacuole 0.421
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : alpha/beta-Hydrolases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G34340.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-1379-MONOMEReggNOG:COG0429eggNOG:KOG1838EMBL:AB024032
EMBL:CP002688EnsemblPlants:AT5G49950EnsemblPlants:AT5G49950.1entrez:835059
ESTHER:arath-Q9LTX5Gene3D:3.40.50.1820GeneID:835059GO:GO:0016021
GO:GO:0016787Gramene:AT5G49950.1hmmpanther:PTHR10794hmmpanther:PTHR10794:SF40
HOGENOM:HOG000241456InterPro:IPR022742InterPro:IPR029058KEGG:ath:AT5G49950
OMA:YSRKSIWPfam:PF12146PhylomeDB:Q9LTX5Proteomes:UP000006548
Reactome:R-ATH-1483191RefSeq:NP_199806.1STRING:3702.AT5G49950.1SUPFAM:SSF53474
TAIR:AT5G49950TMHMM:TMhelixUniGene:At.49152UniGene:At.7927
UniProt:Q9LTX5
Coordinates (TAIR10) chr5:-:20319871..20323552
Molecular Weight (calculated) 60468.80 Da
IEP (calculated) 8.00
GRAVY (calculated) 0.02
Length 537 amino acids
Sequence (TAIR10)
(BLAST)
001: MNCAITEDDL ISPYLIIFKS LLLIPISHYL IFFFLTILLF LYFFLEIHFP KADPISLTFN PNSDFCKFIV SKCRLLHGRY FPTFWLSSPH LQTAFLTLFG
101: KSPPFSYKRI LYQATDGGTI ALDWLMHSDV VEGISQVVNA SNPGTDRTPI AIIVPGLTSD SSAAYIKHIA FRLAKEGWNV VVQNHRGLGG ISLTSDCVYT
201: AGWTEDLRKV IAHIHSQFPE APLFAVGTSI GANVLVKYLG EDGPNTPLIG ATAVCSPWDL LICDRFINRK LVQKVYDRML TIGLQGYAQL HHSIISRIAD
301: WEGIKKSRSV REFDNYATRL VAKFETTDTY YRRSSSSQYV ENVAVPLLCI SALDDPVCTR EAIPWDECRA NKNIVLATTT HGGHLAYYEG LTASSMWWTR
401: VVHEYFEVLL SSPFADRRHK IIPEPLGSSI DQGPFVDAGE HGMVAAASEV DTTRADAEPE DNAQIYVKTS NHLHKDNNPQ VYNNILGPLK KRVDQLSRYS
501: RKSIWLLAYI AIVTTWPLVG PALLFSIKRR FRKLVEK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)