AT3G12010.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:golgi 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: sperm cell, cultured cell; CONTAINS InterPro DOMAIN/s: Colon cancer-associated Mic1-like (InterPro:IPR009755); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:3821337..3825537 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 76416.30 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.54 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.10 | ||||||||||||||||||||||||||||||||
| Length | 682 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MNSSAQAGVG SGALSHVYIH HPSLRCNIPE SNGLFYDDAN RLLICTTSSQ VFSWETSPFN PDVPPSVDSI SEGPILSIRF SLDKKAIAVQ RSDCEIQLFN 101: RETKQILNHK CKAGSESILG FFWSDSPLCD LAIVKTSGMD LFACDSMLNS LRLVETKKAN VNWYIYTHET RLVLLASGLQ CKTFNGFQLS TAGVVRLPRF 201: EMTMARSESN SKPILSAGDL HLVTVYGRIY CLQVDREAML LHLYRFYRDA VVQQGSLPIY SSKLSVNVVD NLLLVHQIDA KVVIIYDLFV DSRAPVSAPL 301: PLLWRGYQVS ETSSQAVNKE IESSESSTSN ENIVMYEDGW TFLVPDLILD QTNKVLWKIH LDLEAISASS SDRTSLLEFL QRRKLEANKA KQLCLGIARA 401: IILERRPATQ VTQAIDVLVT AYSYSVKAGT YKEIKNENAT ASTPTPGASP DSERHRQSGS NIDEEVEMNL SSGSQENMFC ADEQQESQLS SPAISPDELY 501: KFVFTSVEEM MVEESEYLVA IITEFLRSIS AEKLKVDLNI YVMTIKLLAY SKRFAELSLF TTNKIIEPSK EVAFQLLDSG RQNIRVRKLG LDMLRQLSLH 601: HDYISSLVQD GYYLEALRYA QKHKVTSVRS SMFLEAAFAS NDMQHLAAIL RVLSELIPGF KETSEYYTFY GLLNDTSSSV AV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)