AT2G26780.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.500 nucleus 0.500 ASURE: cytosol,nucleus What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : ARM repeat superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); Has 448 Blast hits to 380 proteins in 145 species: Archae - 0; Bacteria - 0; Metazoa - 160; Fungi - 190; Plants - 63; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:11410125..11423598 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 201223.00 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.62 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.03 | ||||||||||||||||||||||||||||||||||||
| Length | 1826 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MEGSSSSSSL ISKSDAELEE MLDRMLTRLA LCDDSKLESL VSNLLPLTIS SLSSQSPVVR NKVLEILSHV NKRVKHQHEI GLPLLALWKL YTDPAAAPMV 0101: RNFAIVYVEM AFERAPAKER EEIAPNTLEN VSKLPKQHQE IILRIAIKVI GECHASKISD DVSAKYRSLI TSQDKDLFLD FCLHMLLYQP SSQGGGSSPG 0201: LSVFQVNRII GKQALKGDTL TRRKLGILNV IGNMDLPGES VYPLYIAASV DSQEPVAKRG EELLKKIASG TNLDDPKLIN RLFLLFNGTT GTENVAPEHN 0301: VAPGNISLKM KLMSGFCRSI AAANSFPATL QCIFGCMYGS GTTLRLKQMG MEFTVWVFKH GKIDQLKLMG PVILNAILKM LDGFTGSETD ALSRETKTFS 0401: FQAIGLLAQR LPQLFREKTE MAVRLFDALK LETQSLRSTI QEAIVSLAAA YKDSPENILR DLEVLLLANS LAGFIKSSIF IASIDQEQNE ARFCALRWAT 0501: SLYNSHHCPS LYICMLSAAD PKLDIREIAL EGLFLKEEGR SIVSNHDHKY PKFIEMLEYI LKQQPKLLDS SEMRSQKLLF PSQVYLVMIK FLVKCFELEM 0601: EESNTQAVGT EFLDSAQKMC SLLEHSLAFE GSAELHACAS KALVSVGSYL PEMVELYFSR KIVWLRSLLS HTDLSTRESV SRLLGMASCA LSDAESCSLL 0701: SELISSISQP QKLRFEAQHG GLCAVGFVSA HCLHRIPTVS KAVTQNAVKY LVEVVNLETA PLASVAMEAL GHIGICGALP FLVNDSSPGT QVLEILQERL 0801: SKLLSGDDIK SVQKIALSLG HICSNETSSS HLKIALDLLF SLSRSKAEEI LFAAGEALSF LWGGVPVTAD MILKTNYTSL STDSNFLMKE VKSLSDVKTD 0901: TEEDSRTTTR ETITGKLFDT LLYSSRKEER CAGTVWMLSL TMYCGQQPSI QLMLPKIQEA FSHLLGDQNE LTQELASQGM SIIYELGDAS MKKSLVDALV 1001: NTLTGTSKRK RAIKLVEESE VFQEGTIGES PSGGKISTYK ELCNLANEMG QPDLIYKFMD LANHQASLNS KRGAAFGFSK IAKQAGDALR PHLRLLIPRL 1101: IRYQYDPDKN VQDAMAHIWK ALIQDPKKAV DEHLNHIFDD LLVQCGSRLW RSREASCLAL ADIIQGRKFD QVKEHLKKLW IAAFRAMDDI KETVRNAGDK 1201: LCRAVTSLTI RICDVTLTEL ADAKQAMDIV LPFLLSEGIM SKVNSVRKAS IGVVMKLAKG AGVALRPHLS DLVCCMLESL SSLEDQGLNY VELHAANIGI 1301: ETEKLENLRI SISKGSPMWE TLDLCINIVD IESLEQLIPR LTQLVRGGVG LNTRVGVASF ISLLVQKVGS EIKPFTGMLL RLLFPVAKEE KSSAAKRAFS 1401: SACGIVLKYS SPSQAQSLIE ETAALHSGDR SSQIACASLF KSFSSTAADI MSSHQSAIVP AIFISRFEDE KQISSLFEEV WEDITSGERV TLQLFLQEIV 1501: NHICESITSS SWASKKKSGK AICKLTEVLG ESLSPHHKRL LQCLVNEIPG RLWEGKDALL DALGALSVAC HEAITKEDPT TPTTILSLIC SACKKKLKKY 1601: RESAFSCLEK VIIAFGDPKF FHAVFPMLYE MCNTASIKTN TQVQAASDAV KTESENGEDG HVPLEKIMEC VKSCIQVATI DDILSAKADL IHVLIISLSP 1701: GFLWTVKMSG ISCVGKLCSR FPSLWTDSMD DLSPSDATKF VHELFHSLVP KLLECIHTVK IAQFHVAASQ CLLELIELYS TISSLHPVEV DFKAEVVSLL 1801: ELEKSEEAKS LLRKSRDALA NLPSLN |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)