AT2G17930.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : Phosphatidylinositol 3- and 4-kinase family protein with FAT domain | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
Phosphatidylinositol 3- and 4-kinase family protein with FAT domain; FUNCTIONS IN: inositol or phosphatidylinositol kinase activity, binding, phosphotransferase activity, alcohol group as acceptor; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403), PIK-related kinase, FAT (InterPro:IPR003151), PIK-related kinase (InterPro:IPR014009), Armadillo-type fold (InterPro:IPR016024), PIK-related kinase, FATC (InterPro:IPR003152), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: phosphotransferases, alcohol group as acceptor;binding;inositol or phosphatidylinositol kinases (TAIR:AT4G36080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr2:-:7784455..7802230 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 436378.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.29 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.10 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 3858 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MSPIQNFEQH SRRLVDLDLP IPTRLEMVVE VRDSLEIAHT AEYLNFLKCY FPAFSVILLQ ITKPQFIDNP EHKLRNIVVE ILNRLPHSEV LRPFVQDLLK 0101: VAMQVLTADN EENGLICIRI IFDLLRNFRP TLENEVQPFL DFVCKIYSIF RFTVSHFFDN VKMEEVKPME MPTSSDQSLT PTPPIGNVQL NPSTRSFKII 0201: TESPLVVMFL FQLYSRLVQT NIPHLLPLMV AAISVPGPEN VPSHLKPQFI ELKGAQVKTV SFLTYLLKSC AEYIRPHEES ICKSIVNLLV TCSDSASIRK 0301: ELLVSLKHVL GTDFKRGLFP LIDTLLDERV LVGTGRACFE SLRPLAYSLL AEIVHHVRGD LSLAQLSRII YLFSRNMHDS TLSLSIHTTC ARLMLNLVEP 0401: IFEKGVDQQS MDEARILLGR ILDAFVGKFS TFKRTIPQLL EEGEVGKDRV TLRSKLELPV QAVLNLQVPV EHSKEVNDCK NLIKTLVMGM KTIIWSITHA 0501: HLPRPQGMNP QALVSQSSAP QGFKGMREDE VWKASGVLKS GVHCLALFKE KDEEKEMLNL FSQILAIMEP RDLMDMFSLC MPELFESMIN NNQLVQIFAA 0601: LLQAPKVYKP FADVLINLLV SSKLDVLKNP DSAATKLVLH LFRCIFGAVT KTPSDFERIL QHHVPVIMEV CMKNATEVEK PLGYMQLLRT VFRGLAGCKY 0701: ELLLRDLIPM LLPCLNILLT MLEGPAGEDM KDLLLELCLT LPARLSSLLP YLPRLMKPLV FCLRGSDELV SLGLRTLEFW VDSLNPDFLE PSMANVMSEV 0801: ILALWSHLRP VPYPWGKKAL QILGKLGGRN RRFLKEPLTL ECKDNPEHGL RLVLTFEPST PFLVPLDKFI NLAVAAVIQR NHGMDIYYRK QALKFLRVCL 0901: LSQLNLPGCV TDVGQTPRQL STLLRSSVDS SWHRSEAVEI KADLGVKTKT QLMAEKSIFK TLLITILAAS SDPDLSDTDD DFVENICRHF AIILHVDYTS 1001: SNASTSTSSL GGSVISTSSR SKSNQSSNLK QLDPLIFLDA LVDVLADENR LHAKAALNAL NVFAETLLFL ARVKHADVLM ARGGHNASMI VSSPSTNPVY 1101: SPHPSVRIPV FEQLLPRLLH GCYGSTWQAQ MGGVMGLGAL VGKVNVETLC YFQVKIVRGL VYVLKRLPVY ASKEQEETSQ VLMQILRVVN NVDEANSEAR 1201: RKSFQDVVEY LATELFNPNA SIPVRKNVQN CLALLASRTG SEVTELLEPL YQLLLQPLIM RPLRSKTVDQ QVGTVAALNF CLALRPPLLK VTPELVNFLQ 1301: EALQIAEADE TVWAVKLMNP KVLTSLNRLR TACIELLCTT MAWTDFRTQT HNELRAKIIS MFFKSLTCRA PEIVAVAKEG LRQVINQQRM PKELLQSSLR 1401: PILVNLAHTK NLSMPLLQGL ARLLELLSNW FNVTLGGKLL EHLKKWLEPE KLAQSQKAWK AGEEPKIAAA IIELFHLLPH AASKFLDELV TLTIDLEAAL 1501: PPGQVYSEIN SPYRLPLTKF LNRYAALAVD YFLSRLSEPK YFRRFMYIIR SDAGQPLREE LAKSPQKILS YAFPEISPKP DPTLSTTAST PPATSSGDEN 1601: HISVKLESSN VASTKANIAS DAYFQGLYLI KTMVKLIPSW LQSNRSVFDT LVLIWKSPAR ISRLQNEQEL NLVQVKESKW LVKCFLNYLR HEKSEVNVLF 1701: DILSIFLFHS RIDYTFLKEF YIIEVAEGYP PNMKRALLLH FLNLFHSKQL GHDHLVQAMQ MLILPMLAHA FQNGQTWEVI DPDIVKTIVE RLLDPPEEVS 1801: AEYDEPLRIE LLQLATLLLK YLQSDLVHHR KELIKFGWNH LKREDSASKQ WAFVNVCHFL DAYQAPEKII LQVFVALLRT CQPENKMLVK QALDILMPAL 1901: PKRLPLGDSR MPIWIRYTKK ILVEEGHSIP NLIHIFLLVV RHSDLFYSCR AQFVPQMVNS LSRLGLPYNT TAENRRLAIE LAGLVVSWER QRQNEMKMVT 2001: DTDGTSQITD EMHTSSGADP KRSTDGSATS EDPSKRVKIE PGLQSICVMS PGGASSIPNV ETPGSATQPD EEFKPNAAME EMIINFLIRV ALVIEPKDRE 2101: TNTMYKQALD LLSQALEVWP SANVKFNYLE KLLSSMPPSQ SDPSTALAQG LDVMNKVLEK QPHLFIRNNI NQISQILEPC FKHKMLDAGK SLCSLLKMVF 2201: TAFPLDAANT PPDIKLLYQK VNELINKHVN TVTAPQTSGD DNSFGSISFV LLVIKTLANV HKNFVDSYVL VRILQRLARD LGSAVGSHPR QGQRTDSDSA 2301: VTSSRQTADV GAVICNIKSV LELIDETVML IADCKRSVTQ ILNTLLSEKG TDASVLLCIL DMIKRWVEDD FSKTGASGLS GSFLTQKDVL TFLNKLSYID 2401: KQHFSSEALE EWDQKYLQLL YGLCADSTKY PLGLRQEVSL KVERHFMLGL RASHPGMRRK FFLLYHESLG KTLFARLQYI IQIQDWEALS DVFWLKQGLD 2501: LLLAILVEDK PISLAPNSAR VLPLLPSDNP GIQHQAPANL EGPEEVTSMF DSIVMKHAQF LSATSKLQVA DVVIPLRELA HTDANVAYHL WVLVFPIVWV 2601: TLLKEEQVAL AKPMISLLSK DYHKKQQGHR PNVVQALLEG LQLSHPQPRM PSELIKYIGK TYNAWHLALA LLESHVMLFM NDSKCAESLA ELYRLLNEED 2701: MRFGLWKKRS ITAETRAGLS LVQHGFWQRA QSLFYQAMVK ATQGTYNNTV PKAEMCLWEE QWLHCASQLS QWDALVDFGK SIENYEILLD SLWKLPDWAY 2801: LKDHVIPKAQ VEETPKLRLV QSYFALHDRN SNGVGDAENT VGKGVDLALE QWWQLPEMSV HARVPLLQQF QQLVEVQESA RIHVDIANGN KVSGNTAVGG 2901: LGNRYADLKD ILETWRLRTP NEWDNMTVWY DMLQWRNEMY NVVIDAFKDF ATSNSPLHHL GFRDKAWNVN KLARIARKQG LYDVCVQILE KMYGHSTMEV 3001: QEAFVKIREQ AKAYLEMKGE RASGLNLINS TNLEYFPDKI KAEIFRLKGD FHLKLNDTES ANIAYSNAIT LFKNLPKGWI SWGSYCDMAY QETQEEIWLE 3101: YAVSCFLQGI RFGVSNSRSH IARVLYLLSF DTANEPVGRV FDKHLDQVPH WVWLSWIPQL LLSLQRTEAP HCKLVLLKIA AVFPQALYYW LRTYLLERRD 3201: AVNKSELGRL VLAQRMQQNA TGAGHGGSNL PSENQIHQGA QTSGAGGTHD SGNPHGQESE RSTTENNLHP GSDQPMHQSS SAINDNNENT VRRNGASLAI 3301: SAAGAFDAAK DIMEALRGKH NNLASELEVL LTEIGSRFVT LPEERLLAVV NALLHRCYKY PTATTAEVPQ PLKKELSGVC RACFSADAVT KHVEFVKEYK 3401: QDFERHLDPE STTTFPATLA ELTARLKKWK NILQSNVEDR FPAVLRLEDE SRVLRDFNVV DVEIPGQYFA DQEVAPDHTV KLDRVGADVP IVRRHGSSFR 3501: RLTLIGSDGS QKHFIVQTSL TPNARSDERI LQLFRVMNQM FDKHKESRRR HIGIHTPIII PVWSQVRMVE DDLMYNTFLE VYENHCARND READLPITHF 3601: KEQLNQAISG QISAEAIGDL RLQAYIDITK TLVNDSIFSQ YMYKTLMSGS HMWAFKKQFA VQLAVSSFMS FMLQIGGRSP NKVLFAKNTG KMFQTDFHPA 3701: YDANGMIEFN EPVPFRLTRN MQAFFSQFGV EGLLMSSMCS AAQAVISSKQ NEHLRYQLAM FFRDELLSWF GRRPLGVPIP PVGGIATLNP AELKHKVNAN 3801: VEDVIKRIRG IAPQYFSEED ENTVEPPQSV QRGVNELVEA ALSPRNLCMM DPTWHPWF |
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)