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AT3G13330.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : proteasome activating protein 200
Curator
Summary (TAIR10)
Encodes a protein that interacts with the 26S proteasome. Mutants are phenotypically indistinguishable from wild type plants under a variety of growth conditions. Protein levels increase upon exposure of seedlings to MG132, a specific, potent, reversible, and cell-permeable proteasome inhibitor.
Computational
Description (TAIR10)
proteasome activating protein 200 (PA200); FUNCTIONS IN: binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3437 (InterPro:IPR021843), Armadillo-type fold (InterPro:IPR016024); Has 512 Blast hits to 355 proteins in 156 species: Archae - 0; Bacteria - 0; Metazoa - 127; Fungi - 262; Plants - 57; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink).
Protein Annotations
BioGrid:5867eggNOG:ENOG410XP7JeggNOG:KOG1851EMBL:AB024034
EMBL:AY080673EMBL:CP002686EnsemblPlants:AT3G13330EnsemblPlants:AT3G13330.1
entrez:820533Gene3D:1.25.10.10GeneID:820533Genevisible:F4JC97
GO:GO:0000502GO:GO:0006281Gramene:AT3G13330.1hmmpanther:PTHR32170
hmmpanther:PTHR32170:SF0HOGENOM:HOG000084133InParanoid:F4JC97InterPro:IPR011989
InterPro:IPR016024InterPro:IPR021843InterPro:IPR032430iPTMnet:F4JC97
KEGG:ath:AT3G13330KO:K06699PaxDb:F4JC97Pfam:F4JC97
Pfam:PF11919Pfam:PF16507PRIDE:F4JC97PRO:PR:F4JC97
Proteomes:UP000006548Reactome:R-ATH-1236978Reactome:R-ATH-174184Reactome:R-ATH-349425
Reactome:R-ATH-68949Reactome:R-ATH-69017Reactome:R-ATH-983168RefSeq:NP_187941.6
STRING:3702.AT3G13330.1SUPFAM:SSF48371TAIR:AT3G13330tair10-symbols:PA200
UniGene:At.27529UniProt:F4JC97
Coordinates (TAIR10) chr3:-:4319804..4330061
Molecular Weight (calculated) 203630.00 Da
IEP (calculated) 6.77
GRAVY (calculated) -0.11
Length 1816 amino acids
Sequence (TAIR10)
(BLAST)
0001: MHLYNEWLPP PVAEETKKEK ESFARVVRCV KELHRPDDPE SVYATLKWIS VIELFVRAKS ELSVEDVSEL VEIGLQIFHS SENKLYAQVR WGNVLVRLIN
0101: KFRKKLSLKV QWRPLYDTLI HAHFSRSPGP EGWRLRQRHF MAVTSLIRSC RRFFPQGAAS EIWSEFMSLL ENPWHNSSFE GSGFVRLFLP TNPENQDFFS
0201: EKWIKNVLEL WDSIPNCQFW NSQWTSVLAR VIKNCSFIDW ESYLPMLFSR FLNMFEVPVA NGSGSYPFSV DVPRNTRFLF SNRTTTPSKS IAQSIVYFLK
0301: PGSSAHEQLE KLVNLLEQYY HPSNGGRWTY SLERFLLHLV IAFQKRLQRE QQSYCYRDPD SLPATCLGKP ERVAFVGVVL KLIDRGQYSK NEHLSETVAA
0401: ATSMLSYVEP SLVLPFVASR FHLALETTTA THQLKTAMMS VAFAGRSILQ SSMSTAKSQD LGGDVDDRMF LDLIGISLSN ALLGMDANDP PKTLATMQLI
0501: GSIFSNMAVL DDSSDDLSFM TMASFSEWLD EFLCRLIALL QHLEPNSVIN EGLSSSATSG TFLVEDGPYY YCMLEILLGR LSGSLYNQAL KKISKFVQTN
0601: ILPGAIAEVG LLCCACVHST PEEAVAQIVE PMLLAVISSL KEIPVNGYGG KGSAETLVSN KQDKQTLSPA LEAAIDYQLK VLSVAITYGG SSLLPYKGLL
0701: IEAISSAFNS SSWKVNGAGD HLLRSLLGSL ILYYPIDQYK CLSRHPAAPA LEEWISTKAS SKDEQVAHSR WHVPTQEETQ FANELLDLHL QSALDDLLSI
0801: CQSNIHSDAG DEKTHLKVTL LRIDSTLQGV LSCLPDFRPS PRHDMVEDLQ FFIAGASGSC VGSAEIREKT AITIHAACKY LLEKKSDDSI LLILIIRIMD
0901: ALGNYGSLEY DEWSNHRQAW KLESAAIVEP PANFITEFNS KGKRRPRWAL IDKAYMHNTW RSSQSSYHLF RTDGNFSPPE PLTFLVDDLL TLCLHNYETV
1001: RVLAGKSLIK LLKRWPQLLS KCVLSLTENL RKPDVQEYVV LGSCAILSSH SVLKHLTTDP KSFSSFLLGI LSSSHHESMK SQKAIIELFV KYNIHFAGLS
1101: RNILRSLESH VEGSTSGDLV SQIGSMSFDS SSLHWRYNLM ANRVLLLLVM SSRIDPSFSL KILDETAGHF LKNLKSQLPQ TRILAISALN ILLKESPHKM
1201: QGKDQPSVSS QETENANSSL DLALSQIFRE EGFFKETFES LSHIHITDTD SSSRGNHGSS SFQSMADKSI TRFYFEFSAS WPRTPSWISL LGSDIFYPSF
1301: ARIFKRLAQE CGVPVLLALK SPLEEFCNAK ERPKQCVAAE ALAGVLHSDV NGLFNEWDSW IMVQLQNVIL GQSVESIPEW AACIRYAVTG KGKQGTKIPV
1401: MRQQILDCIV APLPPTATTT VVAKRYAFLS AALIELSPPK MPVTEVKLHI VLLDELICNM SHSSAQIREA IGVILSVLCS NIRLRMSYQQ EYPTEEGKTD
1501: VDSQLKEENW FKLISAKASE AVKNIQQASI SDSLDTSTDV DMGNAQSNGD SLDDVKWMET LFHFIISSFK SGRASYLLDV IAGFLYPVMS LQETSHKDLS
1601: ILAKAAFELL KWRVFPESHL QKVIGVILSS ADDSNWRIRS STLTYLRTFM YRHTFILTHE DKQKIWKTVE KLLVDSQVEV REHAAAVLAG LMKGGDEDFA
1701: ADFRDRSYAE ANSIQKRRNR RKSSSTQSIA GVHGAVLGLV ASVLSVPYDM PSWLPEHVTL LARFAGEPTP IKSTVTKAVA EFRRTHADTW NIQKDSFTED
1801: QLEILADTSS SSSYFA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)