AT5G43400.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 0.938 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Uncharacterised conserved protein UCP015417, vWA | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Uncharacterised conserved protein UCP015417, vWA; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP015417, vWA (InterPro:IPR011205); BEST Arabidopsis thaliana protein match is: Uncharacterised conserved protein UCP015417, vWA (TAIR:AT5G43390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:17426182..17428149 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 74648.50 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.28 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.39 | ||||||||||||||||||||||||||||||||
| Length | 655 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MASSTTILLG PPSVAGNSPI IKPIHSPETH ISDENTLISQ TATLNLEEPP PMGLTENFSP TFLSSGNPCL DFFFHIVPDT SPDDLIQRLA ISWSHDPLTT 101: LKLICNLRGV RGTGKSDKEG FYTAAFWLYK NHPKTLALNV PALVDFGYFK DLPEILFRIL EGQNMERGKN RVWRKRVQRK FKGKREKKSE ISGEMEDRIL 201: ENAEEIGGSV DKVKARALRK QREFEKAKKA VTRYNSDANY RLLFDRIADL FAVLLKSDLK YLNSNGLTKI SLASKWCPSV DSSYDKATLI CEAIARRMFP 301: REEYEGIEEA HYAYRIRDRL RKEVLVPLHK ALEFPELFMS AKEWNLLKYN RVPSVAMKNY KKLFEEHDSE RFTEFLEDVK SGKKKIAAGA LLPHQIINQL 401: EDDSGSEVGA EVAELQWARM VDDLAKKGKL KNSLAVCDVS GSMSGTPMEV CVALGLLVSE LSEEPWKGKV ITFSENPELH IVTGSSLREK TQFVREMEWG 501: MNTDFQIVFD RILEVAVENN LTDDQMIKRL FVFSDMEFDD AMANSHSEVS YHLSVEDRLK ISKERSKEKW ETDYEVVQRK YKEKGFQNVP EMVFWNLRDS 601: SATPVVANQK GVAMVSGFSK NLLTLFLEEG GIVNPEDVMW IAIKGEEYKK LVVFD |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)