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AT5G37180.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.787
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:28865150 (2017): extracellular region plant-type cell wall
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : sucrose synthase 5
Curator
Summary (TAIR10)
Encodes a protein with sucrose synthase activity (SUS5).
Computational
Description (TAIR10)
sucrose synthase 5 (SUS5); CONTAINS InterPro DOMAIN/s: Sucrose synthase, plant/cyanobacteria (InterPro:IPR012820), Sucrose synthase (InterPro:IPR000368), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: sucrose synthase 6 (TAIR:AT1G73370.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Protein Annotations
BioCyc:MetaCyc:AT5G37180-MONOMERBRENDA:2.4.1.13CAZy:GT4EC:2.4.1.13
eggNOG:COG0438eggNOG:KOG0853EMBL:AB017068EMBL:CP002688
EnsemblPlants:AT5G37180EnsemblPlants:AT5G37180.1entrez:833692GeneID:833692
Genevisible:F4K5W8GO:GO:0005576GO:GO:0005618GO:GO:0005985
GO:GO:0016157GO:GO:0080165Gramene:AT5G37180.1gramene_pathway:2.4.1.13
gramene_pathway:PWY-3821gramene_pathway:PWY-621gramene_pathway:PWYQT-4438gramene_pathway:SUCSYN-PWY
hmmpanther:PTHR12526hmmpanther:PTHR12526:SF379HOGENOM:HOG000240125InParanoid:F4K5W8
InterPro:IPR000368InterPro:IPR001296InterPro:IPR012820KEGG:00500+2.4.1.13
KEGG:ath:AT5G37180KO:K00695ncoils:CoilOMA:AKQRYIH
PaxDb:F4K5W8Pfam:F4K5W8Pfam:PF00534Pfam:PF00862
PRIDE:F4K5W8PRO:PR:F4K5W8ProteinModelPortal:F4K5W8Proteomes:UP000006548
RefSeq:NP_198534.2SMR:F4K5W8STRING:3702.AT5G37180.1SUPFAM:SSF53756
TAIR:AT5G37180tair10-symbols:ATSUS5tair10-symbols:SUS5TIGRfam:TIGR02470
TIGRFAMs:TIGR02470UniGene:At.55179UniProt:F4K5W8
Coordinates (TAIR10) chr5:+:14718238..14722913
Molecular Weight (calculated) 94910.60 Da
IEP (calculated) 6.61
GRAVY (calculated) -0.32
Length 836 amino acids
Sequence (TAIR10)
(BLAST)
001: MEMTSGSLGN GIPEAMGQNR GNIKRCLEKY IENGRRVMKL NELMDEMEIV INDVTQRRRV MEGDLGKILC FTQAVVIPPN VAFAVRGTPG NWQYVKVNSS
101: NLSVEALSST QYLKLKEFLF DENWANDENA LEVDFGALDF TLPWLSLSSS IGNGLSFVSS KLGGRLNDNP QSLVDYLLSL EHQGEKLMMN ETLNTARKLE
201: MSLILADVFL SELPKDTPFQ AFELRFKECG FEKGWGESAG RVKETMRILS EILQAPDPQN IDRFFARVPR IFNVVIFSVH GYFGQTDVLG LPDTGGQVVY
301: ILDQVKALED ELLQRINSQG LNFKPQILVV TRLIPDAKKT KCNQELEPIF GTKYSNILRI PFVTENGILR RWVSRFDIYP YLERFTKDAT TKILDILEGK
401: PDLIIGNYTD GNLVASLMAN KLGITQATIA HALEKTKYED SDIKWKEFDP KYHFSSQFTA DLISMNSADF IIASTYQEIA GSKERAGQYE SHMSFTVPGL
501: YRVVSGINVF DPRFNIAAPG ADDSIYFPFT AQDRRFTKFY TSIDELLYSQ SENDEHIGYL VDKKKPIIFS MARLDVVKNL TGLTEWYAKN KRLRDLVNLV
601: IVGGFFDASK SKDREEISEI KKMHSLIEKY QLKGQFRWIT AQTDRTRNGE LYRSIADTRG AFVQPAHYEA FGLTVIEAMS CGLVTFATNQ GGPAEIIVDG
701: VSGFHIDPSN GEESSDKIAD FFEKSGMDPD YWNMFSNEGL QRINECYTWK IYANKVINMG STYSYWRHLN KDQKLAKQRY IHSFYNLQYR NLVKTIPILS
801: DIPEPPPLPP KPLVKPSASK GSKRTQPRLS FRLFGA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)