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AT1G73370.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.986
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31541795 (2020): plasma membrane
  • PMID:28865150 (2017): extracellular region plant-type cell wall
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : sucrose synthase 6
Curator
Summary (TAIR10)
Encodes a protein with sucrose synthase activity (SUS6).
Computational
Description (TAIR10)
sucrose synthase 6 (SUS6); CONTAINS InterPro DOMAIN/s: Sucrose synthase, plant/cyanobacteria (InterPro:IPR012820), Sucrose synthase (InterPro:IPR000368), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: sucrose synthase 5 (TAIR:AT5G37180.1); Has 8933 Blast hits to 8929 proteins in 1765 species: Archae - 393; Bacteria - 5318; Metazoa - 100; Fungi - 128; Plants - 854; Viruses - 0; Other Eukaryotes - 2140 (source: NCBI BLink).
Protein Annotations
EC:2.4.1.13eggNOG:COG0438eggNOG:KOG0853EMBL:KJ138940
EnsemblPlants:AT1G73370EnsemblPlants:AT1G73370.1entrez:843672ExpressionAtlas:W8Q3K7
GeneID:843672GO:GO:0005985GO:GO:0016157Gramene:AT1G73370.1
gramene_pathway:2.4.1.13gramene_pathway:PWY-3821gramene_pathway:PWY-621gramene_pathway:PWYQT-4438
gramene_pathway:SUCSYN-PWYhmmpanther:PTHR12526hmmpanther:PTHR12526:SF296InterPro:IPR000368
InterPro:IPR001296InterPro:IPR012820KEGG:00500+2.4.1.13OMA:PVENTKH
PaxDb:Q9FX32PaxDb:W8Q3K7Pfam:PF00534Pfam:PF00862
Pfam:Q9FX32PhylomeDB:W8Q3K7PIR:C96760ProteinModelPortal:W8Q3K7
RefSeq:NP_177480.1SMR:W8Q3K7STRING:3702.AT1G73370.1SUPFAM:SSF53756
tair10-symbols:ATSUS6tair10-symbols:SUS6TIGRfam:TIGR02470TIGRFAMs:TIGR02470
UniGene:At.34995UniGene:At.69495UniProt:Q9FX32UniProt:W8Q3K7
Coordinates (TAIR10) chr1:-:27584533..27588326
Molecular Weight (calculated) 106881.00 Da
IEP (calculated) 8.09
GRAVY (calculated) -0.39
Length 942 amino acids
Sequence (TAIR10)
(BLAST)
001: MSSSSQAMLQ KSDSIAEKMP DALKQSRYHM KRCFASFVGG GKKLMKREHL MNEIEKCIED SRERSKILEG LFGYILTCTQ EAAVVPPFVA LAARPNPGFW
101: EYVKVNSGDL TVDEITATDY LKLKESVFDE SWSKDENALE IDFGAIDFTS PRLSLSSSIG KGADYISKFI SSKLGGKSDK LEPLLNYLLR LNHHGENLMI
201: NDDLNTVAKL QKSLMLAVIV VSTYSKHTPY ETFAQRLKEM GFEKGWGDTA ERVKETMIIL SEVLEAPDNG KLDLLFSRLP TVFNVVIFSV HGYFGQQDVL
301: GLPDTGGQVV YILDQVRALE EELLIRINQQ GLGFKPQILV VTRLIPEARG TKCDQELEAI EGTKHSHILR VPFVTNKGVL RQWVSRFDIY PYLERFTQDA
401: TSKILQRLDC KPDLIIGNYT DGNLVASLMA TKLGVTQGTI AHALEKTKYE DSDAKWKELD PKYHFSCQFT ADLIAMNVTD FIITSTYQEI AGSKDRPGQY
501: ESHTAFTMPG LCRVVSGIDV FDPKFNIAAP GADQSVYFPY TEKDKRFTKF HPSIQELLYN EKDNAEHMGY LADREKPIIF SMARLDTVKN ITGLVEWYGK
601: DKRLREMANL VVVAGFFDMS KSNDREEKAE IKKMHDLIEK YKLKGKFRWI AAQTDRYRNS ELYRCIADTK GVFVQPALYE AFGLTVIEAM NCGLPTFATN
701: QGGPAEIIVD GVSGFHIDPN NGDESVTKIG DFFSKCRSDG LYWDNISKGG LKRIYECYTW KIYAEKLLKM GSLYGFWRQV NEDQKKAKKR YIEMLYNLQF
801: KQLTKKVTIP EDKPLPLRLA SLRNLLPKKT TNLGAGSKQK EVTETEKTKQ KSKDGQEQHD VKVGEREVRE GLLAADASER VKKVLESSEE KQKLEKMKIA
901: YGQQHSQGAS PVRNLFWSVV VCLYICYILK QRFFGANSAQ EY
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)