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AT5G24860.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
nucleus 0.590
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : flowering promoting factor 1
Curator
Summary (TAIR10)
encodes a small protein of 12.6 kDa that regulates flowering and is involved in gibberellin signalling pathway. It is expressed in apical meristems immediately after the photoperiodic induction of flowering. Genetic interactions with flowering time and floral organ identity genes suggest that this gene may be involved in modulating the competence to flower. There are two other genes similar to FPF1, FLP1 (At4g31380) and FLP2 (no locus name yet, on BAC F8F16 on chr 4). This is so far a plant-specific gene and is only found in long-day mustard, arabidopsis, and rice.
Computational
Description (TAIR10)
FLOWERING PROMOTING FACTOR 1 (FPF1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to gibberellin stimulus, positive regulation of flower development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10625.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioGrid:17830eggNOG:ENOG410J1ZQeggNOG:ENOG4112CDXEMBL:AF069716
EMBL:AL392145EMBL:BT025027EMBL:CP002688EMBL:Y11988
EnsemblPlants:AT5G24860EnsemblPlants:AT5G24860.1entrez:832555GeneID:832555
Genevisible:O23624GO:GO:0009911GO:GO:0010228Gramene:AT5G24860.1
hmmpanther:PTHR33433hmmpanther:PTHR33433:SF3HOGENOM:HOG000237732IntAct:O23624
KEGG:ath:AT5G24860OMA:QFHKQSSPaxDb:O23624Pfam:O23624
PhylomeDB:O23624PRIDE:O23624PRO:PR:O23624Proteomes:UP000006548
RefSeq:NP_197868.1STRING:3702.AT5G24860.1TAIR:AT5G24860tair10-symbols:ATFPF1
tair10-symbols:FPF1UniGene:At.59UniProt:O23624
Coordinates (TAIR10) chr5:+:8541822..8542154
Molecular Weight (calculated) 12723.10 Da
IEP (calculated) 8.85
GRAVY (calculated) -0.40
Length 110 amino acids
Sequence (TAIR10)
(BLAST)
001: MSGVWVFKNG VIRLVENPNQ SGSDTQNRRK VMVYLPTGEV VSSYSTLEQI LQSLGWERYF GGGDTDLLQF HKRSSIDLIS LPRDFTKFNS VYMYDIVVKN
101: PNYFHVRDSH
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)