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AT5G14500.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : aldose 1-epimerase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
aldose 1-epimerase family protein; FUNCTIONS IN: carbohydrate binding, isomerase activity, aldose 1-epimerase activity, catalytic activity; INVOLVED IN: galactose metabolic process, carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Aldose 1-epimerase (InterPro:IPR008183), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718); BEST Arabidopsis thaliana protein match is: Galactose mutarotase-like superfamily protein (TAIR:AT3G01590.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-1217-MONOMEReggNOG:COG0676eggNOG:KOG1594EMBL:BT020615
EMBL:BT025869EMBL:CP002688EnsemblPlants:AT5G14500EnsemblPlants:AT5G14500.1
entrez:831301Gene3D:2.70.98.10GeneID:831301GO:GO:0005975
GO:GO:0016853GO:GO:0030246Gramene:AT5G14500.1hmmpanther:PTHR11122
hmmpanther:PTHR11122:SF21InterPro:IPR008183InterPro:IPR011013InterPro:IPR014718
InterPro:IPR025532KEGG:ath:AT5G14500KO:K01792OMA:LKPFEEW
Pfam:PF01263PhylomeDB:Q5EAF4PIRSF:PIRSF016020Proteomes:UP000006548
RefSeq:NP_568301.1SMR:Q5EAF4STRING:3702.AT5G14500.1SUPFAM:SSF74650
TAIR:AT5G14500UniGene:At.31924UniProt:Q5EAF4
Coordinates (TAIR10) chr5:-:4674503..4676368
Molecular Weight (calculated) 34789.50 Da
IEP (calculated) 6.54
GRAVY (calculated) -0.47
Length 306 amino acids
Sequence (TAIR10)
(BLAST)
001: MPLNVVNDRD GSSRILLTDP AGSTAEVLLY GGQVVSWKNE RREKLLYMST KAQLKPPKAI RGGLPISFPQ FGNFGALERH GFARNRFWSL DNDPSPLPPA
101: NQQSTVDLVL KSTEDDLKIW PHSFELRVRI SISPGKLTII PRVRNTDTKA FSFMFSLRNY LYVSDISEVR VEGLETLDYL DNLMRRERFT EQADAITFDG
201: EVDKVYLNTP TKIAIIDHER KRTIELRKEG MPNAAVWNPW DKKAKSIADM GDEDYTTMLC VDSGAIESPI VLKPHEEWKG RQELSIVSSS YCSGQLDPRK
301: VLYGDY
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)