AT3G17365.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:golgi 0.637 What is SUBAcon? |
|||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G60910.1); Has 1248 Blast hits to 1247 proteins in 293 species: Archae - 22; Bacteria - 262; Metazoa - 311; Fungi - 51; Plants - 169; Viruses - 0; Other Eukaryotes - 433 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr3:-:5947144..5948766 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 27353.30 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 4.49 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.44 | ||||||||||||||||||||||||||||
| Length | 239 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MATEAPTQSY SEQWYWDDRY KNESEPFDWY QKYSPLAPLI NLYVPQRNQR VLVIGCGNSA FSEGMVDDGY EDVVSIDISS VVIDTMIKKY SDRPQLKYLK 101: MDVRDMKAFE DASFDAVIDK GTLDSILCGS NSRQYSTQML EEVWRVLKDK GVYILITYGA PIYRLRLFKE SCSWTTKLHV IDKSLTDQPL DTPKWELTKP 201: LPLDADGSSV ESAIGKNPDV HYIYVCIKDE SSKMEADAA |
||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)