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AT4G10050.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.997
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:14760709 (2004): plant-type vacuole
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : esterase/lipase/thioesterase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
esterase/lipase/thioesterase family protein; FUNCTIONS IN: hydrolase activity; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073), Protein phosphatase methylesterase, eukaryotic (InterPro:IPR016812); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
EC:3.1.1.-eggNOG:COG0596eggNOG:KOG2564EMBL:AF386943
EMBL:AY081500EMBL:CP002687EnsemblPlants:AT4G10050EnsemblPlants:AT4G10050.1
entrez:826596ESTHER:arath-T5L19.180Gene3D:3.40.50.1820GeneID:826596
GO:GO:0005773GO:GO:0006482GO:GO:0052689Gramene:AT4G10050.1
hmmpanther:PTHR14189HOGENOM:HOG000212435InterPro:IPR000073InterPro:IPR016812
InterPro:IPR029058KEGG:ath:AT4G10050KO:K13617MEROPS:S33.A38
OMA:LYTWRIEPANTHER:PTHR14189Pfam:PF12697PhylomeDB:Q94F26
PIRSF:PIRSF022950PRINTS:PR00111Proteomes:UP000006548RefSeq:NP_567350.1
SMR:Q94F26STRING:3702.AT4G10050.1SUPFAM:SSF53474TAIR:AT4G10050
UniGene:At.19290UniProt:Q94F26
Coordinates (TAIR10) chr4:-:6284620..6287186
Molecular Weight (calculated) 38565.00 Da
IEP (calculated) 5.97
GRAVY (calculated) -0.25
Length 350 amino acids
Sequence (TAIR10)
(BLAST)
001: MDSSSNLNPL REDTSEEHLE PIEAPASVFA ARPLRPPSTN SSEKYSPVEW KSYFDKEDDI SITGSDDVFH VYMAGNEGPV VFCLHGGGYS GLSFSIVASK
101: IKEKARVVAM DLRGHGKSVS ENELELSLET MSNDVLAVIK ELYGDSPPAI VLVGHSMGGS VAVQVAANKT LPSLAGLVVV DVVEGTAISS LIHMQKILSN
201: RMQHFPSIEK AIEYSVRGGS LRNIDSARVS IPTTLKYDDS KHCYVYRTRL EETEQYWKGW YDGLSEKFLS SPVPKLLLLA GTDRLDRTLT IGQMQGKFQM
301: IVVKHTGHAI QEDVPEEFAN LVLNFISRNR IGPHGVEIPG MWKPSQQTKT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)