AT4G10050.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:cytosol 0.997 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : esterase/lipase/thioesterase family protein | ||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
esterase/lipase/thioesterase family protein; FUNCTIONS IN: hydrolase activity; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073), Protein phosphatase methylesterase, eukaryotic (InterPro:IPR016812); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr4:-:6284620..6287186 | ||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 38565.00 Da | ||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 5.97 | ||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.25 | ||||||||||||||||||||||||||||||||||||||||
Length | 350 amino acids | ||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MDSSSNLNPL REDTSEEHLE PIEAPASVFA ARPLRPPSTN SSEKYSPVEW KSYFDKEDDI SITGSDDVFH VYMAGNEGPV VFCLHGGGYS GLSFSIVASK 101: IKEKARVVAM DLRGHGKSVS ENELELSLET MSNDVLAVIK ELYGDSPPAI VLVGHSMGGS VAVQVAANKT LPSLAGLVVV DVVEGTAISS LIHMQKILSN 201: RMQHFPSIEK AIEYSVRGGS LRNIDSARVS IPTTLKYDDS KHCYVYRTRL EETEQYWKGW YDGLSEKFLS SPVPKLLLLA GTDRLDRTLT IGQMQGKFQM 301: IVVKHTGHAI QEDVPEEFAN LVLNFISRNR IGPHGVEIPG MWKPSQQTKT |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)