AT3G61540.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : alpha/beta-Hydrolases superfamily protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: peptidase activity, aminopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S33, prolyl aminopeptidase (InterPro:IPR002410), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); Has 1602 Blast hits to 1599 proteins in 535 species: Archae - 0; Bacteria - 1162; Metazoa - 5; Fungi - 126; Plants - 75; Viruses - 0; Other Eukaryotes - 234 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:22773399..22775699 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 57588.50 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.34 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.08 | ||||||||||||||||||||||||||||||||||||||||
| Length | 515 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MLATHALVTP IPKLTAFVLS LSTTPSRLSG SVPGLIDFYR RRRFCRVITS MAEAGSVYVD VAGESKSEHV TGKWFSVPEL RLRDHRFIVP LDYSKSSPKI 101: TVFAREIVAV GKEEQAMPYL LYLQGGPGFE GPRPSEASGW IQRACEEFRV VLLDQRGTGL STPLTCSSML QFKSAKELAD YLVHFRADNI VKDAEFIRVR 201: LVPKADPWTI LGQSFGGFCA LTYLSFAPEG LKQVLITGGI PPIGKACTAD DVYEAGFEQV ARQNEKYYKR FPQDIEIVRE LVNYLAESEG GGVPLPSGGI 301: LTPKGLQTLG LSGLGSSTGF ERLHYMLERV WDPILVTGAP KCISQFFLNA FESWHSFDTN PLYALLHEAI YCEGASSGWS AHRLRDKYEY KFDAMKAVKE 401: SQPVLFTGEM IFPWMFDEIH ALKPFKAAAD LLAKKEDWPP LYDVPRLQNN KVPVAAAVYY EDMYVNFKLV TETASHISGI RLWVTNEFMH SGLRDAGRQI 501: IDHLLGMING KKPLF |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)