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AT3G47590.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : alpha/beta-Hydrolases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: BAAT/Acyl-CoA thioester hydrolase C-terminal (InterPro:IPR014940); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G29840.1); Has 4006 Blast hits to 4003 proteins in 1107 species: Archae - 84; Bacteria - 2507; Metazoa - 7; Fungi - 75; Plants - 235; Viruses - 7; Other Eukaryotes - 1091 (source: NCBI BLink).
Protein Annotations
eggNOG:COG1073eggNOG:KOG4667EMBL:AK175734EMBL:AL132955
EMBL:BT010441EMBL:CP002686EnsemblPlants:AT3G47590EnsemblPlants:AT3G47590.1
entrez:823913ESTHER:arath-F1P2.140Gene3D:3.40.50.1820GeneID:823913
GO:GO:0016787Gramene:AT3G47590.1hmmpanther:PTHR10992hmmpanther:PTHR10992:SF808
HOGENOM:HOG000237992InterPro:IPR022742InterPro:IPR029058KEGG:ath:AT3G47590
KO:K06889MEROPS:S09.A17OMA:SASRMCKPfam:PF12146
Pfam:PF12695PhylomeDB:Q9SN79PIR:T45719Proteomes:UP000006548
RefSeq:NP_190343.1SMR:Q9SN79SUPFAM:SSF53474TAIR:AT3G47590
UniGene:At.35792UniGene:At.72450UniProt:Q9SN79
Coordinates (TAIR10) chr3:-:17536133..17537515
Molecular Weight (calculated) 35050.70 Da
IEP (calculated) 8.04
GRAVY (calculated) -0.48
Length 309 amino acids
Sequence (TAIR10)
(BLAST)
001: MRTLLHNFNF VPQDSPYYKT SPFPTSSFFN VRFPIKNNQI SCNKAKNLRM DPSKGIQEQR IVIPNRHNEK LVGLLHETGS TDIVVLCHGF RSNKSNQIMN
101: NVAAAIQKEG ISAFRFDFSG NGESEGSFYY GNYNHEADDL HSVVQYFSNK NRVVPIILGH SKGGDVVLLY ASKYHDVRNV INLSGRYDLK KGIRERLGED
201: FLERIKQQGF IDVGDGKSGY RVTEKSLMDR LSTDIHEACL KIDKECRVLT VHGSEDEVIP VEDAKEFAKI IPNHKLEIVE GANHGYTEHQ SQLVSTVMEF
301: IKTVIVKNN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)