AT3G50520.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:cytosol 1.000 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : Phosphoglycerate mutase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
Phosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT5G04120.1); Has 16927 Blast hits to 16736 proteins in 2503 species: Archae - 87; Bacteria - 12791; Metazoa - 870; Fungi - 486; Plants - 272; Viruses - 0; Other Eukaryotes - 2421 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr3:+:18748058..18749418 | ||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 25980.50 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 6.64 | ||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.66 | ||||||||||||||||||||||||||||||||||||||||||||||||
Length | 230 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MEESRFDSED VDYAEIVVVR HGETSWNAER KIQGHLDVEL NDAGRQQAQR VAERLSKEQK ISHVYSSDLK RAFETAQIIA AKCGKLEVLT DRDLRERHLG 101: DMQGLVYQEA SKIRPEAYKA FSSNRTDVDI PGGGESLDKL YDRCTTALQR IGDKHKGERI VVVTHGGVIR SLYERARPSA RKVEKILNTS VNVFRLFDGD 201: KWTIQVWGDV SHLEETGFLQ SGFGGDRTSG |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)