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AT3G50520.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Phosphoglycerate mutase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Phosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT5G04120.1); Has 16927 Blast hits to 16736 proteins in 2503 species: Archae - 87; Bacteria - 12791; Metazoa - 870; Fungi - 486; Plants - 272; Viruses - 0; Other Eukaryotes - 2421 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G50520-MONOMERBioGrid:9534eggNOG:COG0406eggNOG:ENOG410IUDB
EMBL:AL133363EMBL:AY035101EMBL:AY063062EMBL:CP002686
EnsemblPlants:AT3G50520EnsemblPlants:AT3G50520.1entrez:824216Gene3D:3.40.50.1240
GeneID:824216Genevisible:Q9SCS3GO:GO:0003824Gramene:AT3G50520.1
hmmpanther:PTHR23029hmmpanther:PTHR23029:SF51HOGENOM:HOG000221683InParanoid:Q9SCS3
InterPro:IPR001345InterPro:IPR013078InterPro:IPR029033KEGG:ath:AT3G50520
KO:K15634OMA:SRIIQGHPaxDb:Q9SCS3Pfam:PF00300
Pfam:Q9SCS3PhylomeDB:Q9SCS3PIR:T46083PRIDE:Q9SCS3
PRO:PR:Q9SCS3PROSITE:PS00175ProteinModelPortal:Q9SCS3Proteomes:UP000006548
RefSeq:NP_190621.1scanprosite:PS00175SMART:SM00855SMR:Q9SCS3
STRING:3702.AT3G50520.1SUPFAM:SSF53254TAIR:AT3G50520UniGene:At.1443
UniProt:Q9SCS3
Coordinates (TAIR10) chr3:+:18748058..18749418
Molecular Weight (calculated) 25980.50 Da
IEP (calculated) 6.64
GRAVY (calculated) -0.66
Length 230 amino acids
Sequence (TAIR10)
(BLAST)
001: MEESRFDSED VDYAEIVVVR HGETSWNAER KIQGHLDVEL NDAGRQQAQR VAERLSKEQK ISHVYSSDLK RAFETAQIIA AKCGKLEVLT DRDLRERHLG
101: DMQGLVYQEA SKIRPEAYKA FSSNRTDVDI PGGGESLDKL YDRCTTALQR IGDKHKGERI VVVTHGGVIR SLYERARPSA RKVEKILNTS VNVFRLFDGD
201: KWTIQVWGDV SHLEETGFLQ SGFGGDRTSG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)