AT1G19710.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:golgi 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : UDP-Glycosyltransferase superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process; LOCATED IN: Golgi apparatus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G75420.1); Has 6148 Blast hits to 6144 proteins in 1382 species: Archae - 171; Bacteria - 4108; Metazoa - 97; Fungi - 39; Plants - 107; Viruses - 0; Other Eukaryotes - 1626 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:6814920..6816716 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 53741.20 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 10.22 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.09 | ||||||||||||||||||||||||||||||||||||
| Length | 479 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAKPSTSMWA TLQKKRWPLM ILLVLSVSTV GMILVRSTFD SCSVSGKRCS REKEDNSDIK IQSVSGSLNP LEFMKSKLVL LVSHELSLSG GPLLLMELAF 101: LLRGVESEVV WITNQKPVEE DEVIKVLEHK MLDRGVQVIS AKSQKAIDTA LKSDLVVLNT AVAGKWLDAV LKDNVPKVLP KVLWWIHEMR GHYFKPDLVK 201: HLPFVAGAMI DSHATAEYWK NRTHDRLGIK MPKTYVVHLG NSKELMEVAE DSFAKNVLRE QVRESLGVRN EDILFGIINS VSRGKGQDLF LRAFHESLKV 301: IKETKKLEVP TMHAVVVGSD MSAQTKFETE LRNFVQEMKL QKIVHFVNKT MKVAPYLAAI DVLVQNSQAR GECFGRITIE AMAFKLPVLG TAAGGTMEIV 401: VNRTTGLLHN TGKDGVLPLA KNIVKLATNV KMRNTMGKKG YERVKEMFLE HHMSHRIASV LREVLQHAKI HSRTTNSDH |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)