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AT1G20560.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
peroxisome 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31871212 (2020): mitochondrion
  • PMID:31520498 (2020): mitochondrion
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:19329564 (2009): peroxisome
  • PMID:18931141 (2008): peroxisome
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : acyl activating enzyme 1
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
acyl activating enzyme 1 (AAE1); FUNCTIONS IN: AMP binding; INVOLVED IN: metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT2G17650.1); Has 77741 Blast hits to 70781 proteins in 3571 species: Archae - 1189; Bacteria - 50806; Metazoa - 3349; Fungi - 3424; Plants - 2387; Viruses - 1; Other Eukaryotes - 16585 (source: NCBI BLink).
Protein Annotations
EC:6.2.1.-eggNOG:COG0318eggNOG:KOG1176EMBL:AC027665
EMBL:AC069251EMBL:AF372942EMBL:AF503760EMBL:AY078039
EMBL:CP002684EnsemblPlants:AT1G20560EnsemblPlants:AT1G20560.1entrez:838644
ExpressionAtlas:F4HUK6GeneID:838644Genevisible:F4HUK6GO:GO:0005777
GO:GO:0006631GO:GO:0016874hmmpanther:PTHR24095hmmpanther:PTHR24095:SF119
HOGENOM:HOG000230005InParanoid:F4HUK6InterPro:IPR000873InterPro:IPR020845
InterPro:IPR025110OMA:IIMAGAPPaxDb:F4HUK6Pfam:F4HUK6
Pfam:PF00501Pfam:PF13193PIR:G86338PRIDE:F4HUK6
PRO:PR:F4HUK6PROSITE:PS00455ProteinModelPortal:F4HUK6Proteomes:UP000006548
RefSeq:NP_564116.1scanprosite:PS00455SMR:F4HUK6STRING:3702.AT1G20560.1
SUPFAM:SSF56801TAIR:AT1G20560tair10-symbols:AAE1UniGene:At.20481
UniProt:F4HUK6
Coordinates (TAIR10) chr1:-:7119927..7121730
Molecular Weight (calculated) 61076.80 Da
IEP (calculated) 7.91
GRAVY (calculated) -0.10
Length 556 amino acids
Sequence (TAIR10)
(BLAST)
001: MKMEGTIKSP ANYVPLTPIS FLDRSAVVYA DRVSIVYGSV KYTWRQTRDR CVRIASALSQ LGISTGDVVS VLAPNVPAMV ELHFGVPMAG ALLCTLNIRH
101: DSSLVAVLLR HSGTKVIFAD HQFLQIAEGA CEILSNKGDK VPILVLIPEP LTQSVSRKKR SEEMMEYEDV VAMGKSDFEV IRPTDECDAI SVNYTSGTTS
201: SPKGVVYSHR GAYLNSLAAV LLNEMHSSPT YLWTNPMFHC NGWCLLWGVT AIGGTNICLR NVTAKAIFDN ISQHKVTHMG GAPTILNMII NAPESEQKPL
301: PGKVSFITGA APPPAHVIFK MEELGFSMFH SYGLTETYGP GTICTWKPEW DSLPREEQAK MKARQGVNHL GLEEIQVKDP VTMRTLPADG VTMGEVVFRG
401: NTVMNGYLKN PEATKEAFKG GWFWSGDLGV KHPDGYIELK DRSKDIIISG GENISSIEVE STLFTHPCVL EAAVVARPDE YWGETACAFV KLKDGSKASA
501: EELISYCRDR LPHYMAPRSI VFEDLPKTST GKVQKFVLRT KAKALVSLSK KGRSKL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)