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AT3G01590.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 0.980
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:26572690 (2016): extracellular region plant-type cell wall
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Galactose mutarotase-like superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Galactose mutarotase-like superfamily protein; FUNCTIONS IN: isomerase activity, carbohydrate binding, aldose 1-epimerase activity, catalytic activity; INVOLVED IN: galactose metabolic process, carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Aldose 1-epimerase (InterPro:IPR008183), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718); BEST Arabidopsis thaliana protein match is: aldose 1-epimerase family protein (TAIR:AT5G14500.1); Has 1892 Blast hits to 1891 proteins in 757 species: Archae - 0; Bacteria - 1255; Metazoa - 39; Fungi - 135; Plants - 251; Viruses - 0; Other Eukaryotes - 212 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-1066-MONOMERBioCyc:ARA:GQT-1067-MONOMERDNASU:821108eggNOG:COG0676
eggNOG:KOG1594EMBL:AC009325EMBL:AY056177EMBL:AY088102
EMBL:AY091263EMBL:CP002686EnsemblPlants:AT3G01590EnsemblPlants:AT3G01590.1
EnsemblPlants:AT3G01590.2entrez:821108Gene3D:2.70.98.10GeneID:821108
GO:GO:0005975GO:GO:0016853GO:GO:0030246Gramene:AT3G01590.1
Gramene:AT3G01590.2hmmpanther:PTHR11122hmmpanther:PTHR11122:SF21InterPro:IPR008183
InterPro:IPR011013InterPro:IPR014718InterPro:IPR025532KEGG:ath:AT3G01590
KO:K01792OMA:CVDSGVIPfam:PF01263PhylomeDB:Q9SS96
PIRSF:PIRSF016020Proteomes:UP000006548RefSeq:NP_566143.1RefSeq:NP_850493.1
SMR:Q9SS96STRING:3702.AT3G01590.1SUPFAM:SSF74650TAIR:AT3G01590
UniGene:At.18463UniProt:Q9SS96
Coordinates (TAIR10) chr3:+:226647..228346
Molecular Weight (calculated) 34740.50 Da
IEP (calculated) 6.18
GRAVY (calculated) -0.45
Length 306 amino acids
Sequence (TAIR10)
(BLAST)
001: MPLNLGNDGD GSSRIILTEP RGSTAEVLLF GGQVISWKNE RREELLYMSS KAQYKPPKAI RGGIPVCFPQ FGNFGGLERH GFARNKFWSH DEDPSPLPPA
101: NKQSSVDLIL KSTEDDLKTW PHSFELRIRI SISPGKLTLI PRVRNIDSKA FSFMFALRNY LYVSDISEVR VEGLETLDYL DNLIGKERFT EQADAITFDG
201: EVDRVYLNTP TKIAVIDHER KRTIELRKEG MPNAVVWNPW DKKAKTIADM GDEDYKTMLC VDSGVIEPLV LLKPREEWKG RQELSIVSSS YCSGQLDPRK
301: VLYGDI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)