AT5G07630.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.999 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : lipid transporters | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
lipid transporters; FUNCTIONS IN: lipid transporter activity; INVOLVED IN: nuclear division, lipid transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RFT1 (InterPro:IPR007594); Has 367 Blast hits to 362 proteins in 190 species: Archae - 2; Bacteria - 15; Metazoa - 110; Fungi - 135; Plants - 51; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:2410703..2414523 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 70472.40 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 8.97 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.31 | ||||||||||||||||||||||||||||
| Length | 611 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEYIYTLFQP KLLVDDDIQD HAGKTVRTIT RVRCKFDKDF SDESDLNMLW SYYWLAEWSK APDSITWIGA AIESSLTQRG TLSFASPNKM ATNSDNNVNL 101: SRIFKFSLSR QFISRSIPFV FNSWIVRHLT ERDYALYAIQ FHLFVTCVLF LSREGFRRAC LRAGTKRDGP ESEENVTRIL KVAWVTVPLG IAITIAACIF 201: VLWWQNLSYS DPYAQAIWIH GFACVLELMA EPLYILSQTL LKLQLRLIVE TVATLARCVT LYSLLVMQTN MEKVIIFALS QVAYGGSLFI GYWAYFLICG 301: VYRSSNLFPF RPGNFMDFDN DLSKMCKLFT FQSFRKLILQ EGEKLVLVWL DTPYNQAVYG IVDKLGSLVV RMVFLPFEES SYTIFARFAS GDYQERNKKL 401: GIYLTVALKL VILIGLIFMA FGPSYSYSLI RLLYGEKWSD GEASLALQFY CLYIIVLAMN GTSEAFLHAV GTKNELERSN DMLLIFSLIY VALNILLIRS 501: AGAIGLIMAN SLNMIFRIIY SGRFIQRYFQ GTSSFSFRKC FPLGWQILIL SSIITLISEK TILDRKNFWE TFPLHFGIGV ICFCLSAIVI YRRERVFIKR 601: IKRFRDYNHD D |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)