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AT3G57170.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : N-acetylglucosaminyl transferase component family protein / Gpi1 family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
N-acetylglucosaminyl transferase component family protein / Gpi1 family protein; FUNCTIONS IN: transferase activity, phosphatidylinositol N-acetylglucosaminyltransferase activity; INVOLVED IN: GPI anchor biosynthetic process; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: N-acetylglucosaminyl transferase component (InterPro:IPR007720); Has 334 Blast hits to 333 proteins in 180 species: Archae - 0; Bacteria - 0; Metazoa - 114; Fungi - 132; Plants - 32; Viruses - 0; Other Eukaryotes - 56 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410XSXIeggNOG:KOG1183EMBL:CP002686EnsemblPlants:AT3G57170
EnsemblPlants:AT3G57170.1entrez:824884GeneID:824884GO:GO:0006506
GO:GO:0016021GO:GO:0017176Gramene:AT3G57170.1hmmpanther:PTHR21329
hmmpanther:PTHR21329:SF3InParanoid:F4J262InterPro:IPR007720KEGG:ath:AT3G57170
KO:K03860OMA:TEIICSWPaxDb:F4J262Pfam:PF05024
PRIDE:F4J262ProteinModelPortal:F4J262Proteomes:UP000006548Reactome:R-ATH-162710
RefSeq:NP_191276.2STRING:3702.AT3G57170.1TAIR:AT3G57170TMHMM:TMhelix
UniGene:At.34860UniProt:F4J262
Coordinates (TAIR10) chr3:-:21159620..21162259
Molecular Weight (calculated) 63250.00 Da
IEP (calculated) 9.16
GRAVY (calculated) 0.42
Length 560 amino acids
Sequence (TAIR10)
(BLAST)
001: MILQSIELWN SIQVLDCIIY TGMGILYLNA MSTYVIVYDT PVFGSHHFSL SFSNSSPQTK APLKKPKWVD DLHNRKPLNE METVILSLNC AAAAKIAYKK
101: ISTQLETSSQ NFSISYLISS LTWRLLATIL GSLSSLYYSL AQFFYLLSSF LIFSWVHIAS RRVLKNTWIN FRIRSCQILY WPIFLEEIDM MSISCVKHAE
201: EAALQRHSTW SAMAVDLVLG NLIGLGLLFN TESVCSFVFD FAKEFTNGIL RSGSVWLMGV PAGFKLNTEL AGVLGMVSLN VIQIWSTLWV FMASFIFCLI
301: RVIAILGITF GATVSAAFVI DVITFATLHI MALHWAITLV YSHQIQALAA LWRLFRGRKL NPLRQRMDSY GYTVKQHVVG SLLFTPLLLL LPTTSVFYIF
401: FTITSTTINS ICMLIEFAIS VIHATPYAEV MIWLVRRKRF PCGVWFEMEH CGEHILKSND AFEDSKSLLE EHGTPEKNSL MVSNLRSNFL TLGQILLPHY
501: KTIFSGISAS SLTTSARGVL SGKRMPSKLG LDLPPPRPWL HMPLRQYWML CHNSISSCGK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)