AT3G57170.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : N-acetylglucosaminyl transferase component family protein / Gpi1 family protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
N-acetylglucosaminyl transferase component family protein / Gpi1 family protein; FUNCTIONS IN: transferase activity, phosphatidylinositol N-acetylglucosaminyltransferase activity; INVOLVED IN: GPI anchor biosynthetic process; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: N-acetylglucosaminyl transferase component (InterPro:IPR007720); Has 334 Blast hits to 333 proteins in 180 species: Archae - 0; Bacteria - 0; Metazoa - 114; Fungi - 132; Plants - 32; Viruses - 0; Other Eukaryotes - 56 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:21159620..21162259 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 63250.00 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.16 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.42 | ||||||||||||||||||||||||||||||||
| Length | 560 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MILQSIELWN SIQVLDCIIY TGMGILYLNA MSTYVIVYDT PVFGSHHFSL SFSNSSPQTK APLKKPKWVD DLHNRKPLNE METVILSLNC AAAAKIAYKK 101: ISTQLETSSQ NFSISYLISS LTWRLLATIL GSLSSLYYSL AQFFYLLSSF LIFSWVHIAS RRVLKNTWIN FRIRSCQILY WPIFLEEIDM MSISCVKHAE 201: EAALQRHSTW SAMAVDLVLG NLIGLGLLFN TESVCSFVFD FAKEFTNGIL RSGSVWLMGV PAGFKLNTEL AGVLGMVSLN VIQIWSTLWV FMASFIFCLI 301: RVIAILGITF GATVSAAFVI DVITFATLHI MALHWAITLV YSHQIQALAA LWRLFRGRKL NPLRQRMDSY GYTVKQHVVG SLLFTPLLLL LPTTSVFYIF 401: FTITSTTINS ICMLIEFAIS VIHATPYAEV MIWLVRRKRF PCGVWFEMEH CGEHILKSND AFEDSKSLLE EHGTPEKNSL MVSNLRSNFL TLGQILLPHY 501: KTIFSGISAS SLTTSARGVL SGKRMPSKLG LDLPPPRPWL HMPLRQYWML CHNSISSCGK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)