AT3G13225.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : WW domain-containing protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
WW domain-containing protein; CONTAINS InterPro DOMAIN/s: WW/Rsp5/WWP (InterPro:IPR001202); Has 4868 Blast hits to 3360 proteins in 446 species: Archae - 8; Bacteria - 476; Metazoa - 1490; Fungi - 707; Plants - 530; Viruses - 89; Other Eukaryotes - 1568 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:4258928..4261728 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 84460.00 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.45 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.82 | ||||||||||||||||||||||||||||||||
| Length | 771 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MQMADQQQTG ENSSALDSRA EVETGYTTVS NSTTLDGLNK QTVPSVQASG SVSLEHQAPT DVTSQWKMIL HEESNQYYYW NTETGETSWE LPTVLTQTTF 101: AYGTGYNESG PMVTDASTLI SSVEPSYFVP VQNSFTGTDY STFPTVELDG RNKSEDLYVK SLGTDGHQVE CRIDSVVSCQ EDLSRPGNSD HVHTYFDAGA 201: ATDLPSRLLS QIESLLEKLR SLKRSHGNFH SNEQITKYIL EVEVRHSDVK ALILDTSPLL SFWLHTEKQL KRLEDSVNDE IYQLAKSAVM DEPETNKSPP 301: KEKLVADANT ESESEDSERD GELAQSGKSL HSDESADGSG DGSPKHSPNH PAGQSDIIPS TEMLQKAGSP DVEDVDMDVD MEVEESVPVS SVQVIDASDG 401: KMFSQTEPSN LHTDVPPPPG EEWIPPPPSE SEDVPPPPPD SYSEPIPPPP DNGHVASSLS SDSLGVPYTV PQSYMHQSAD YATQYNLSYP ESNYQYTNAV 501: TLAPNTQFYG HVDGSQVSLP QSTFYYETVP GTTEVVPAAA SAGEAYYDFN GAAPLFPVIS SGESSLHHSG VGSANHHIPN NSSTAAVPSS RSNDSTEVGS 601: SATASKSTDV TSGSSLLAKG QTKVKRTKKK TVAATSTLRS NKKVSSLVDK WKAAKEELND SEEEEDDSEI LDRKRKREIE EWKSRQIASG EAKDNANFQP 701: LGGDWREKVK RKRERAEKSQ KKDPEKQQKP DLTKLSANLP SEWQAYWDES TKKVYYGNTS TSQTSWTRPT T |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)