AT1G70620.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cyclin-related | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
cyclin-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; Has 112611 Blast hits to 60905 proteins in 2332 species: Archae - 119; Bacteria - 12075; Metazoa - 52298; Fungi - 16219; Plants - 10822; Viruses - 1423; Other Eukaryotes - 19655 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:26626634..26630755 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 98821.30 Da | ||||||||||||||||||||||||
| IEP (calculated) | 7.64 | ||||||||||||||||||||||||
| GRAVY (calculated) | -1.33 | ||||||||||||||||||||||||
| Length | 897 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDAYQPPPQY LRPPSGPPPP TDPYHQYYQH QARPPVPPPT QPGGPPAWYS NQFHHPHSPS PPPPPPPQWG PPSPHYPQGQ PYSSPAYPPH QPPFNAGANG 101: NSQFPPPSTG APIPPPYPQA NQEWGNPNWG YQQQQGHTPQ ANSNVEDWAV KAKEWAAANK DQQSQQSAPN QPSGQVYQQQ YPTHGYQDFH QQAVPGVSYQ 201: QHQQFPVPPT TQPERYPNYA TGNESFPGVG LPQENLPTSS AIHQQEVPYS YSSVAEESGN TTQHEVHISL PDGGGPVHTE QHMQYAYGDQ SAAPPSNFSD 301: HNAWQPHTTS GVVYPPIPSS AQSIPQHDSS MAIPPVSGHI MPPYGRFPPP NPQPVGPPYA FGTKPPLHPV AAFMDDSYAA SSVPPKKAPV PNWLKEELLK 401: KKADLGRPSS GRFEERESMD DDVLYKPPTK ADQPDKKSFS PSNSSDEEEE DEMDAARTTE INMEIKRILT EVLLKVTDEL FDEIATKVIN EDEAIPKADP 501: LHKASAKILV SVEGANTKAS SGSPADVLGL ASYASDDDDA DTDAASDANA DENGVESLGV GSRHNVSQQP STEKLPDPEA MASAKLDPAV GVNANSGKNS 601: KSGLEDYSQM PGSTRKDDEA GSTKISDVSA SSGLDDDTSG SRKEHPDRTD SDKDAILDEP HVKNSGVKSD CNLRQDSNKP YGKDLSDEVS TDRSRIVETK 701: GGKEKGDSQN DSKDRMKEND LKSAEKVKGV ESNKKSTDPH VKKDSRDVER PHRTNSKEDR GKRKEKEKEE ERSRHRRAEN SSKDKRRRSP TSNESSDDSK 801: RKSRSRRRSV SPSPVRSRRK RSSPSSDESS DDSKRKSSSK RKNRSPSPGK SRRRHVSSRS PHSKHSQHKN TLYSSHDKSR SKRSRSRSRS PHRRHRK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)