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AT4G32660.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:24134884 (2013): cytoskeleton microtubules
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Protein kinase superfamily protein
Curator
Summary (TAIR10)
Encodes protein kinase AME3.
Computational
Description (TAIR10)
AME3; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: FUS3-complementing gene 1 (TAIR:AT3G53570.4); Has 81361 Blast hits to 80024 proteins in 2474 species: Archae - 78; Bacteria - 7680; Metazoa - 32971; Fungi - 11771; Plants - 12371; Viruses - 307; Other Eukaryotes - 16183 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410XQF2eggNOG:KOG0671EMBL:AL161581EMBL:BT029776
EnsemblPlants:AT4G32660EnsemblPlants:AT4G32660.1entrez:829401ExpressionAtlas:A1L4Y9
GeneID:829401GO:GO:0004672GO:GO:0005524Gramene:AT4G32660.1
hmmpanther:PTHR24058hmmpanther:PTHR24058:SF44IntAct:A1L4Y9InterPro:IPR000719
InterPro:IPR008271InterPro:IPR011009OMA:YSIGQVRPaxDb:A1L4Y9
Pfam:P51568Pfam:PF00069Pfscan:PS50011PhylomeDB:A1L4Y9
PRIDE:A1L4Y9PROSITE:PS00108PROSITE:PS50011ProteinModelPortal:A1L4Y9
RefSeq:NP_194992.1scanprosite:PS00108SMART:SM00220SMR:A1L4Y9
STRING:3702.AT4G32660.1SUPFAM:SSF56112TAIR:AT4G32660tair10-symbols:AME3
UniGene:At.21547UniGene:At.71320UniProt:A1L4Y9UniProt:P51568
Coordinates (TAIR10) chr4:+:15756396..15759107
Molecular Weight (calculated) 46226.70 Da
IEP (calculated) 9.18
GRAVY (calculated) -0.50
Length 400 amino acids
Sequence (TAIR10)
(BLAST)
001: MIANGFESMD KERVRKRPRM TWDEAPAEPE AKRAVIKGHG SDGRILSPPL RDDDRDGHYV FSLRDNLTPR YKILSKMGEG TFGRVLECWD RDTKEYVAIK
101: IIRSIKKYRD AAMIEIDVLQ KLVKSDKGRT RCVQMKNWFD YRNHICIVFE KLGPSLFDFL KRNKYSAFPL ALVRDFGCQL LESVAYMHEL QLVHTDLKPE
201: NILLVSSENV KLPDNKRSAA NETHFRCLPK SSAIKLIDFG STVCDNRIHH SIVQTRHYRS PEVILGLGWS YQCDLWSIGC ILFELCTGEA LFQTHDNLEH
301: LAMMERALGP LPEHMTRKAS RGAEKYFRRG CRLNWPEGAN SRESIRAVKR LDRLKDMVSK HVDNTRSRFA DLLYGLLAYD PSERLTANEA LDHPFFKSSS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)