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AT1G73350.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 46 Blast hits to 46 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 3; Plants - 36; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IWCMeggNOG:ENOG4111Q4SEMBL:BT001928EMBL:CP002684
EnsemblPlants:AT1G73350EnsemblPlants:AT1G73350.1entrez:843670ExpressionAtlas:Q84WW0
GeneID:843670Gramene:AT1G73350.1hmmpanther:PTHR37202hmmpanther:PTHR37202:SF1
HOGENOM:HOG000239292ncoils:CoilPhylomeDB:Q84WW0Proteomes:UP000006548
RefSeq:NP_177478.2STRING:3702.AT1G73350.2TAIR:AT1G73350UniGene:At.28468
UniProt:Q84WW0
Coordinates (TAIR10) chr1:-:27575683..27577126
Molecular Weight (calculated) 22954.10 Da
IEP (calculated) 9.53
GRAVY (calculated) -1.09
Length 208 amino acids
Sequence (TAIR10)
(BLAST)
001: MAGREVKEYT NLSDPKDKKS GKGKIDDEDV TFQRMVAKMQ EVAGERGGYL HGRGDSDDLL YLKEQMEAEE DAERLLRRTE KRAFAAFKKA ATQADSSPAS
101: IPLPLRVEPK PKSGIRQQDL LRKVVEVKPK RPKISTPSSP SLSPPVRSDR GPTEAKVHRD KQKEEAMPVL KKPGADRNDG KATESNGQGQ NAPKGLLGLA
201: YDSSDEED
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)