AT3G62620.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
|
||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||
| Description (TAIR10) | protein_coding : sucrose-phosphatase-related | ||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||
| Computational Description (TAIR10) |
sucrose-phosphatase-related; Has 214 Blast hits to 196 proteins in 68 species: Archae - 0; Bacteria - 32; Metazoa - 51; Fungi - 30; Plants - 20; Viruses - 5; Other Eukaryotes - 76 (source: NCBI BLink). | ||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||
| Coordinates (TAIR10) | chr3:+:23159845..23161606 | ||||||||||||||||||||
| Molecular Weight (calculated) | 39431.90 Da | ||||||||||||||||||||
| IEP (calculated) | 8.37 | ||||||||||||||||||||
| GRAVY (calculated) | -0.51 | ||||||||||||||||||||
| Length | 358 amino acids | ||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MFAAVSVRAS LKTLFHGRHS SSYSRYCEIA AISKRISQDR FSDGNRILNS LKLSGNGVGI KLFNCGFHSS PQCCTSESDV GVKTHAPALF SHLEDDYFSE 101: LGPVEKEVDE NVIVKMLTEK PVISLKTKGN KKKKTKKQEL ASDSISKPKL LTEKPEVSWK VNGKKKTEAN ASSPAKDATD SKVSFSKPTK SSSQVQDQKS 201: KSQKKISPSS EPENETISKG SATSNTLSSV LVIRIGNLNS KTADSLIHSM CFSIGPLEGL TRVNEDTVDV LFRLKDLKEA DSILEELNDA TVDNSQWTAE 301: IVLEAEEASK NQMGMRITSC LEDLDKQLLM QRILGKDLEV LLHSVMHLEN HPMARGRD |
||||||||||||||||||||
| See Also |
|
||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)