AT4G24740.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : FUS3-complementing gene 2 | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
a LAMMER-type protein kinase that co-precipitates with serine/arginine-rich (SR) proteins in vitro, interaction modulated by phosphorylation of the proteins. | ||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
FUS3-complementing gene 2 (FC2); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: FUS3-complementing gene 1 (TAIR:AT3G53570.4); Has 78986 Blast hits to 77771 proteins in 2339 species: Archae - 44; Bacteria - 6536; Metazoa - 32511; Fungi - 11289; Plants - 12892; Viruses - 291; Other Eukaryotes - 15423 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:12754729..12757653 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 49568.90 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.03 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.49 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 427 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEMERVHEFP HTHMDRRPRK RARLGWDVLP QATKAQVGMF CGQEIGNISS FASSGAPSDN SSSLCVKGVA RNGSPPWRED DKDGHYIFEL GDDLTPRYKI 101: YSKMGEGTFG QVLECWDRER KEMVAVKIVR GVKKYREAAM IEIEMLQQLG KHDKGGNRCV QIRNWFDYRN HICIVFEKLG SSLYDFLRKN NYRSFPIDLV 201: REIGWQLLEC VAFMHDLRMI HTDLKPENIL LVSSDYVKIP EYKGSRLQRD VCYKRVPKSS AIKVIDFGST TYERQDQTYI VSTRHYRAPE VILGLGWSYP 301: CDVWSVGCII VELCTGEALF QTHENLEHLA MMERVLGPFP QQMLKKVDRH SEKYVRRGRL DWPDGATSRD SLKAVLKLPR LQNLIMQHVD HSAGELINMV 401: QGLLRFDPSE RITAREALRH PFFARRR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)