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AT5G07510.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 0.957
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : glycine-rich protein 14
Curator
Summary (TAIR10)
encodes a glycine-rich protein that is expressed in low abundance in stems and leaves, and very low abundance in flowers.
Computational
Description (TAIR10)
glycine-rich protein 14 (GRP14); CONTAINS InterPro DOMAIN/s: Oleosin (InterPro:IPR000136); BEST Arabidopsis thaliana protein match is: glycine-rich protein 18 (TAIR:AT5G07520.1); Has 29506 Blast hits to 10438 proteins in 893 species: Archae - 17; Bacteria - 14272; Metazoa - 7933; Fungi - 1193; Plants - 3433; Viruses - 277; Other Eukaryotes - 2381 (source: NCBI BLink).
Protein Annotations
EMBL:CP002688EMBL:DQ446928EnsemblPlants:AT5G07510EnsemblPlants:AT5G07510.1
entrez:830644ExpressionAtlas:Q1PDZ0GeneID:830644GO:GO:0008289
GO:GO:0012511GO:GO:0016021GO:GO:0019915Gramene:AT5G07510.1
hmmpanther:PTHR33203hmmpanther:PTHR33203:SF7InterPro:IPR000136OMA:GNISKWL
Pfam:PF01277Proteomes:UP000006548RefSeq:NP_196368.2STRING:3702.AT5G07510.1
TAIR:AT5G07510tair10-symbols:ATGRP-4tair10-symbols:ATGRP14tair10-symbols:GRP-4
tair10-symbols:GRP14TMHMM:TMhelixUniGene:At.46233UniProt:Q1PDZ0
Coordinates (TAIR10) chr5:-:2377858..2378763
Molecular Weight (calculated) 18463.80 Da
IEP (calculated) 12.43
GRAVY (calculated) 0.63
Length 193 amino acids
Sequence (TAIR10)
(BLAST)
001: MFSFLILQVS EVFQVVIAAV VSIVFLVLAG LTLAGSATAL TITTPLFIIF SPILVPATIA TAVITTGLTA GGALGTMAAA SLLSLRRRFG RRRFGGLRRF
101: GGGRRFGGRF GKPGGGGLGG GGLPGGLGGL GGGGLPGGLG GLGGGENPLA KISKMFGPGA AGAASGDAPP AETAPAAGAA PAAGAEPAAP PTW
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)