AT5G07510.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:extracellular 0.957 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : glycine-rich protein 14 | ||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
encodes a glycine-rich protein that is expressed in low abundance in stems and leaves, and very low abundance in flowers. | ||||||||||||||||||||||||||||
Computational Description (TAIR10) |
glycine-rich protein 14 (GRP14); CONTAINS InterPro DOMAIN/s: Oleosin (InterPro:IPR000136); BEST Arabidopsis thaliana protein match is: glycine-rich protein 18 (TAIR:AT5G07520.1); Has 29506 Blast hits to 10438 proteins in 893 species: Archae - 17; Bacteria - 14272; Metazoa - 7933; Fungi - 1193; Plants - 3433; Viruses - 277; Other Eukaryotes - 2381 (source: NCBI BLink). | ||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr5:-:2377858..2378763 | ||||||||||||||||||||||||||||
Molecular Weight (calculated) | 18463.80 Da | ||||||||||||||||||||||||||||
IEP (calculated) | 12.43 | ||||||||||||||||||||||||||||
GRAVY (calculated) | 0.63 | ||||||||||||||||||||||||||||
Length | 193 amino acids | ||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MFSFLILQVS EVFQVVIAAV VSIVFLVLAG LTLAGSATAL TITTPLFIIF SPILVPATIA TAVITTGLTA GGALGTMAAA SLLSLRRRFG RRRFGGLRRF 101: GGGRRFGGRF GKPGGGGLGG GGLPGGLGGL GGGGLPGGLG GLGGGENPLA KISKMFGPGA AGAASGDAPP AETAPAAGAA PAAGAEPAAP PTW |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)