AT3G42850.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 0.939 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Mevalonate/galactokinase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Mevalonate/galactokinase family protein; FUNCTIONS IN: kinase activity, phosphotransferase activity, alcohol group as acceptor, galactokinase activity, ATP binding; INVOLVED IN: metabolic process, phosphorylation; LOCATED IN: cytoplasm; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: GHMP kinase (InterPro:IPR006204), Mevalonate/galactokinase (InterPro:IPR006206), Galactokinase galactose-binding domain (InterPro:IPR019539), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Galactokinase, glycosyltransferase (InterPro:IPR012369), GHMP kinase, C-terminal (InterPro:IPR013750); BEST Arabidopsis thaliana protein match is: arabinose kinase (TAIR:AT4G16130.1); Has 3577 Blast hits to 3572 proteins in 1442 species: Archae - 89; Bacteria - 2609; Metazoa - 174; Fungi - 132; Plants - 130; Viruses - 0; Other Eukaryotes - 443 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:14940114..14945291 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 105742.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.06 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.11 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 964 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSESESSSSP RSSLVFAYYV TGHGFGHATR VVEVVRYLIS SGHRVHVVSA APEFVFTMEI HSPNLFIRKV LLDCGSVQAD ALSVDRRASL EKYCEIAVEP 101: RDSILATEAE WLKSIKANLV VSDVVPIACR AAANAGIRSV CVTNFSWDFI YAEYVMAAGH HHRSIVWQIA EDYSHCEFLI RLPGYCPMPA FHDVIDIPLV 201: VRPVHKSGQE VRRELGVPDN VKLLIFNFGG QPTGWTLKEE YLPAGWLCLV CGASAKQELP PNFIALPKDA YTPDVIAASD CMLGKIGYGT VSEALAYKLR 301: FIFVRRDYFN EEPFLRKMLE YYQGGVEMIR RDLLAGCWAP YLERAVTLKP CYDGGIDGGE VAAKILQDTA MGKKRSKLNL SGARRLRDAI ILGFQLQRAP 401: GRDLSVPEWY QVAGNEAGIP SVDQTQKPSK FVEGFEILHG DHHGLSDTIG FLDSLATLAK IGGHHQEREH LAAAALFNWE EDIVVARAPG RLDVMGGIAD 501: YSGSLVLLMP TREACHAAVQ RNHPSKQKLW KHAEARHHSR DTPILEIVSF GSELSNRGPT FDMDLSDFME EDGKPISYDK AYHYFSRDPS QKWAAYVAGT 601: ILVLMREMDV RFEDSISILV SSTVPEGKGV SSSASVEVAT MSAVAAAHGL EISPRDVALL CQKVENYVVG APCGVMDQMA SACGEANKLL AMICQPAEIL 701: GLVEIPSHIR FWGIDSGIRH SVGGSDYGSV RIGAFIGKTM IRSFAASFAE TNSEEAEEES SELIESDTSL DYLCNLSPHR FQALYASKLP QSITGEEFLE 801: KYGDHGDSVT TIDKDGTYAI MAPTRHPIYE NFRVQAFKAL LTATPSEEQV IGLGELMYQC HDSYSACGIG SDGTDRLVRL VQNMENLKSS KTENGTLYGA 901: KITGGGSGGT VCVIGKSSLR SSEQILQIQQ KYKEATGFMP YVFEGSSPGA GKFGYLKIRK NSAT |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)