suba logo
AT1G75910.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : extracellular lipase 4
Curator
Summary (TAIR10)
member of Lipase proteins
Computational
Description (TAIR10)
extracellular lipase 4 (EXL4); CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G75920.2); Has 3243 Blast hits to 3207 proteins in 173 species: Archae - 0; Bacteria - 215; Metazoa - 0; Fungi - 34; Plants - 2982; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G75910-MONOMEREC:3.1.1.-eggNOG:ENOG410JWV9eggNOG:ENOG41104JW
EMBL:AC007396EMBL:AK227028EMBL:AY028612EMBL:CP002684
EnsemblPlants:AT1G75910EnsemblPlants:AT1G75910.1entrez:843924Gene3D:3.40.50.1110
GeneID:843924Genevisible:Q0WUV7GO:GO:0005578GO:GO:0016042
GO:GO:0016298GO:GO:0070505Gramene:AT1G75910.1hmmpanther:PTHR22835
hmmpanther:PTHR22835:SF184HOGENOM:HOG000237650InParanoid:Q0WUV7InterPro:IPR001087
InterPro:IPR008265InterPro:IPR013830KEGG:ath:AT1G75910OMA:FMKGNIW
PaxDb:Q0WUV7Pfam:PF00657Pfam:Q0WUV7PhylomeDB:Q0WUV7
PIR:A96788PRIDE:Q0WUV7PRO:PR:Q0WUV7PROSITE:PS01098
ProteinModelPortal:Q0WUV7Proteomes:UP000006548RefSeq:NP_177719.1scanprosite:PS01098
STRING:3702.AT1G75910.1SUPFAM:SSF52266TAIR:AT1G75910tair10-symbols:EXL4
UniGene:At.25298UniProt:Q0WUV7
Coordinates (TAIR10) chr1:+:28501511..28503096
Molecular Weight (calculated) 37913.10 Da
IEP (calculated) 10.30
GRAVY (calculated) -0.05
Length 343 amino acids
Sequence (TAIR10)
(BLAST)
001: MCSKITLVLT LFSSYFISTD AVNGSFPALL AFGDSILDTG NNNFLLTFMK GNIWPYGRSF SMRRATGRFG NGRVFSDIVA EGLGIKKILP AYRKLFNSPS
101: DLRTGVCFAS GGAGVDPVTS KLLRVLTPKD QVNDFKGYIR KLKATAGPSR ASSIVSNAVI LVSQGNNDIG ISYFGTPTAA FRGLTPNRYT TKLAGWNKQF
201: MKELYDQGAR KFAVMGVIPL GCLPMTRIFL GGFVITCNFF ANRVAEQYNG KLRSGTKSWG REAGFRGAKF VYVDMYNTLM DVIKNYRRYG FSNEKNGCCC
301: MITAIIPCPN PDKYVFYDFV HPSEKAYRTI SKKLVQDIKN GLA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)